RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TAPBPO15533 448 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 CYP17A1P05093 508 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 VIPR1P32241 457 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ACVR1BP36896 505 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 SPINT3P49223 89 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 KHKP50053 298 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 BRAT1Q6PJG6 821 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 NEIL2Q969S2 332 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 FUZQ9BT04 418 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 RNF121Q9H920 327 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 STOML2Q9UJZ1 356 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF225Q9UK10 706 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 TYRP14679 529 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 DRD5P21918 477 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ALAS2P22557 587 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 UQCRC1P31930 480 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 EIF2DP41214 584 aaKnown RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 PIK3CBP42338 1070 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 CTSOP43234 321 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 RACK1P63244 317 aaKnown RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 CAP1Q01518 475 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ID2Q02363 134 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 MTFR2Q6P444 385 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 TAS1R1Q7RTX1 841 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ASB15Q8WXK1 588 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 SCRN2Q96FV2 425 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 CCDC115Q96NT0 180 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 DPCDQ9BVM2 203 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 DPAGT1Q9H3H5 408 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 TMEM27Q9HBJ8 222 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 RLIMQ9NVW2 624 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 STOX2Q9P2F5 926 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ADAMTSL1Q8N6G6 1762 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 BRWD1Q9NSI6 2320 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 SLC31A1O15431 190 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 PRNPP04156 253 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 CSNK2A2P19784 350 aaPredicted RBP13.27□□□□□ -0.28
COL6A1-201ENST00000361866 STOMP27105 288 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 HOXC13P31276 330 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 CCR8P51685 355 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 RGS1Q08116 209 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 ODF4Q2M2E3 257 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 BCL2L15Q5TBC7 163 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 MANEALQ5VSG8 457 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 RTL4Q6ZR62 310 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 TMCO2Q7Z6W1 182 aaPredicted RBP13.27□□□□□ -0.28
COL6A1-201ENST00000361866 MRPL10Q7Z7H8 261 aaKnown RBP13.27□□□□□ -0.28
COL6A1-201ENST00000361866 KREMEN2Q8NCW0 462 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 RGMAQ96B86 450 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 CARS2Q9HA77 564 aaKnown RBP13.27□□□□□ -0.28
COL6A1-201ENST00000361866 NEUROD4Q9HD90 331 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 COMMD9Q9P000 198 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 FBXO10Q9UK96 956 aa13.27□□□□□ -0.28
COL6A1-201ENST00000361866 LOC102723532A0A0G2JNH3 316 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 RPP14O95059 124 aaKnown RBP13.27□□□□□ -0.29
COL6A1-201ENST00000361866 RHAGQ02094 409 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 SP140Q13342 867 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 XAF1Q6GPH4 301 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 CNIH2Q6PI25 160 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 GLYATL1Q969I3 302 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 COQ8BQ96D53 544 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 VNN3Q9NY84 501 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 CNIH4Q9P003 139 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 NDOR1Q9UHB4 597 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 BAIAP2Q9UQB8 552 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 IRAK3Q9Y616 596 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 LOC105369274A0A096LPK9 316 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 UNCXA6NJT0 531 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 NDUFS4O43181 175 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 ERP29P30040 261 aaKnown RBP13.27□□□□□ -0.29
COL6A1-201ENST00000361866 GPR4P46093 362 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 ZNHIT3Q15649 155 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-201ENST00000361866 SLC14A2Q15849 920 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 XKR4Q5GH76 650 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 LIN54Q6MZP7 749 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 OR4N4Q8N0Y3 316 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 VWA5B2Q8N398 1253 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 OR51A7Q8NH64 312 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 MARK1Q9P0L2 795 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
COL6A1-201ENST00000361866 NRAPQ86VF7 1730 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3DA0A087WVF3 549 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3IA0A087WXS9 549 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3EA0A087X179 549 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3KA0A087X1G2 549 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3FA6NER0 549 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 METTL15A6NJ78 407 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3LB9A6J9 549 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 PROM1O43490 865 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3HP0C7X1 549 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 OSMP13725 252 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 GSTM3P21266 225 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 UQCRC2P22695 453 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 MTNR1AP48039 350 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 MAN2A2P49641 1150 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 GMFBP60983 142 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 LDLRAD1Q5T700 205 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3GQ6DHY5 549 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3CQ6IPX1 549 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 SLC30A6Q6NXT4 461 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms