RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 MKLN1Q9UL63 735 aa13.21□□□□□ -0.3
CTR9-201ENST00000361367 ENDOUP21128 410 aaKnown RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 IMPA1P29218 277 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 HK3P52790 923 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 ARFIP1P53367 373 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 SERTAD2Q14140 314 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 COLEC12Q5KU26 742 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 AFMIDQ63HM1 303 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 FAM109BQ6ICB4 259 aaPredicted RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 KCTD8Q6ZWB6 473 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 EPHX3Q9H6B9 360 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 GEMIN8Q9NWZ8 242 aaKnown RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 MGAT4BQ9UQ53 548 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 BTBD3Q9Y2F9 522 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 ANHXE9PGG2 379 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 RNF144AP50876 292 aaPredicted RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 ADPRHP54922 357 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 HYAL1Q12794 435 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 LIN52Q52LA3 116 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 PDSS1Q5T2R2 415 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 P4HA3Q7Z4N8 544 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 CLEC14AQ86T13 490 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 SLC45A3Q96JT2 553 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 BIRC8Q96P09 236 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 ALOXE3Q9BYJ1 711 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 SMURF2Q9HAU4 748 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 SRPK3Q9UPE1 567 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 YBX2Q9Y2T7 364 aaKnown RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 A0A1B0GTW7 788 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 LOC100130705A0A1B0GUX0 176 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 EFCAB9A8MZ26 197 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 NPIPA5E9PKD4 350 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 AIREO43918 545 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 NUDT6P53370 316 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 MAZP56270 477 aaKnown RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 TAP2Q03519 686 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 CAMK1Q14012 370 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 UGT3A2Q3SY77 523 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 HENMT1Q5T8I9 393 aaKnown RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 DNM1P34Q6PK57 102 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 LARP4Q71RC2 724 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTR9-201ENST00000361367 SLCO6A1Q86UG4 719 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 OR13H1Q8NG92 308 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 PSMA8Q8TAA3 256 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 TMEM19Q96HH6 336 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 METTL2AQ96IZ6 378 aaKnown RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 NPIPA1Q9UND3 350 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 PCDHB14Q9Y5E9 798 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 SGK494L7N484 410 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 TLX2O43763 284 aaPredicted RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 CD2P06729 351 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 DDCP20711 480 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 OTX2P32243 289 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 GNALP38405 381 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 DNASE1L1P49184 302 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 ZXDBP98169 803 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 RCAN2Q14206 197 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 PYDC2Q56P42 97 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 NEK7Q8TDX7 302 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 C3orf30Q96M34 536 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 COQ7Q99807 217 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 CRB3Q9BUF7 120 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 LGR4Q9BXB1 951 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 COMMD4Q9H0A8 199 aa13.2□□□□□ -0.3
CTR9-201ENST00000361367 CCM2LQ9NUG4 571 aaPredicted RBP13.2□□□□□ -0.3
CTR9-201ENST00000361367 NUP205Q92621 2012 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 E2F3O00716 465 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 HAT1O14929 419 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 STAT5AP42229 794 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 CLCN2P51788 898 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 RACK1P63244 317 aaKnown RBP13.19□□□□□ -0.3
CTR9-201ENST00000361367 TUBB3Q13509 450 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 CD300LGQ6UXG3 332 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 TMEM151BQ8IW70 566 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 EID2Q8N6I1 236 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTR9-201ENST00000361367 SLC6A18Q96N87 628 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 RHBDL2Q9NX52 303 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 SARDHQ9UL12 918 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 KLHL18O94889 574 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 MC1RQ01726 317 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 PON3Q15166 354 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 PAGE3Q5JUK9 113 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 LILRA3Q8N6C8 439 aaPredicted RBP13.19□□□□□ -0.3
CTR9-201ENST00000361367 STON2Q8WXE9 905 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 FCGR1BQ92637 280 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 GORASP1Q9BQQ3 440 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 INPP5KQ9BT40 448 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 SEC61A2Q9H9S3 476 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 CENPMQ9NSP4 180 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 SOX1O00570 391 aaPredicted RBP13.19□□□□□ -0.3
CTR9-201ENST00000361367 DCNP07585 359 aaKnown RBP13.19□□□□□ -0.3
CTR9-201ENST00000361367 NR2C1P13056 603 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 CD27P26842 260 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 RHAGQ02094 409 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 PUM1Q14671 1186 aaKnown RBP eCLIP13.19□□□□□ -0.35e-7■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms