RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PRAF2O60831 178 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 PABPC4LP0CB38 370 aaKnown RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 GSCP56915 257 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 GLIS3Q8NEA6 775 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 EDNRBP24530 442 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 PSMG2Q969U7 264 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF75AQ96N20 296 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 MAGIXQ9H6Y5 334 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CRTC1Q6UUV9 634 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 HS6ST2Q96MM7 605 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF416Q9BWM5 594 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 REV1Q9UBZ9 1251 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ANKRD28O15084 1053 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 RHBDL3P58872 404 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 DNAJC22Q8N4W6 341 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SLC28A3Q9HAS3 691 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 HIF1ANQ9NWT6 349 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 UQCRC2P22695 453 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CYP1B1Q16678 543 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 DDX1Q92499 740 aaKnown RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 KLK3P07288 261 aaPredicted RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 HGSNATQ68CP4 663 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CREB3L2Q70SY1 520 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CHTF18Q8WVB6 975 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CCL22O00626 93 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 KLRC4O43908 158 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 VASH1Q7L8A9 365 aaPredicted RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF695Q8IW36 515 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 JOSD2Q8TAC2 188 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 TCEAL2Q9H3H9 227 aaPredicted RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SERTAD4Q9NUC0 356 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 ATRNO75882 1429 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 NAP1L6A6NFF2 107 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SOBPA7XYQ1 873 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 GPR143P51810 404 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 FKBP1AP62942 108 aaKnown RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CCM2Q9BSQ5 444 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 AMY2AP04746 511 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 PRKCGP05129 697 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 DCNP07585 359 aaKnown RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SLC2A5P22732 501 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 MITD1Q8WV92 249 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 A0A1W2PS29 197 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 GJB1P08034 283 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM225Q6GV28 225 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 IDO2Q6ZQW0 420 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 STXBP5LQ9Y2K9 1186 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SPATA31C2B4DYI2 1134 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 KCNC1P48547 511 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CX3CR1P49238 355 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM41BQ5BJD5 291 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 NETO2Q8NC67 525 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CHFRQ96EP1 664 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 UQCC2Q9BRT2 126 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 TSPAN10Q9H1Z9 355 aaPredicted RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 FABP6P51161 128 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 RAB11BQ15907 218 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 AWAT2Q6E213 333 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 TAS1R3Q7RTX0 852 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 GPR142Q7Z601 462 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SLC7A13Q8TCU3 470 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 WDR18Q9BV38 432 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CACNG6Q9BXT2 260 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SMCO4Q9NRQ5 59 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 J3QR89 54 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 HAS3O00219 553 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 GAD2Q05329 585 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SPHARQ15513 63 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 FAM69AQ5T7M9 428 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 UBE2UQ5VVX9 321 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SMYD5Q6GMV2 418 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SPATC1Q76KD6 591 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 THOC6Q86W42 341 aaKnown RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 MS4A15Q8N5U1 240 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 OR2T35Q8NGX2 323 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 BBS10Q8TAM1 723 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 BCAS3Q9H6U6 928 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 CA5BQ9Y2D0 317 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 E9PI62 339 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SERPINF1P36955 418 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SLC35F1Q5T1Q4 408 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 RTL6Q6ICC9 239 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 RBM23Q86U06 439 aaKnown RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 ZFP82Q8N141 532 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 FAM83FQ8NEG4 500 aaPredicted RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 OR5M3Q8NGP4 307 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 FKBP10Q96AY3 582 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 FAM83CQ9BQN1 747 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 SLC22A5O76082 557 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 RAB8AP61006 207 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 MEF2DQ14814 521 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 PRSS58Q8IYP2 241 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 FN3KRPQ9HA64 309 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 WDR6Q9NNW5 1121 aaKnown RBP8.93□□□□□ -0.98
VPS13A-203ENST00000360280 FBXW11Q9UKB1 542 aa8.93□□□□□ -0.98
VPS13A-203ENST00000360280 C2CD4BA6NLJ0 364 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ADAP00813 363 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SYT14Q8NB59 555 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms