RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 CLCNKAP51800 687 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 LIMK1P53667 647 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 IL1RL1Q01638 556 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 LIPJQ5W064 366 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 USP30Q70CQ3 517 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 ANKRD46Q86W74 232 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 CCDC28AQ8IWP9 274 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 MSRB3Q8IXL7 192 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 OR7G3Q8NG95 312 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 SLC13A3Q8WWT9 602 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 NCLNQ969V3 563 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 BARD1Q99728 777 aaKnown RBP17.69■□□□□ 0.42
SNX11-201ENST00000359238 TBCDQ9BTW9 1192 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 OSGEPL1Q9H4B0 414 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 C14orf119Q9NWQ9 140 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 SLC25A37Q9NYZ2 338 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 MOSPD1Q9UJG1 213 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 ARHGAP33O14559 1287 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 NUDT1P36639 197 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 ARHGDIAP52565 204 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 GPLD1P80108 840 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 KIAA1614Q5VZ46 1190 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 KLHDC8AQ8IYD2 350 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 OXR1Q8N573 874 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 FBXO15Q8NCQ5 510 aaPredicted RBP17.69■□□□□ 0.42
SNX11-201ENST00000359238 HUS1BQ8NHY5 278 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 GTF2H4Q92759 462 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 SGPP1Q9BX95 441 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 DPY30Q9C005 99 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 CLMPQ9H6B4 373 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 DUSP12Q9UNI6 340 aa17.69■□□□□ 0.42
SNX11-201ENST00000359238 SAP18O00422 153 aaKnown RBP17.68■□□□□ 0.42
SNX11-201ENST00000359238 GBAP04062 536 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 GRK5P34947 590 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 PNLIPRP1P54315 467 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 GRHL2Q6ISB3 625 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 LYPD8Q6UX82 237 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 ZNF852Q6ZMS4 543 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 CEP68Q76N32 757 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 NEDD4LQ96PU5 975 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 PITX2Q99697 317 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 COPS4Q9BT78 406 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 RUBCNLQ9H714 662 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 FGF22Q9HCT0 170 aa17.68■□□□□ 0.42
SNX11-201ENST00000359238 PHPT1Q9NRX4 125 aaPredicted RBP17.68■□□□□ 0.42
SNX11-201ENST00000359238 OR52A4PA6NMU1 304 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 FAM220BPB1ANY3 271 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 PGRP06401 933 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 MYCLP1P12525 358 aaPredicted RBP17.67■□□□□ 0.42
SNX11-201ENST00000359238 SOX6P35712 828 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 HNF4AP41235 474 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 RAE1P78406 368 aaKnown RBP17.67■□□□□ 0.42
SNX11-201ENST00000359238 SMU1Q2TAY7 513 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 RUNDC3AQ59EK9 446 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 NOXRED1Q6NXP6 359 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 CCDC71Q8IV32 467 aaPredicted RBP17.67■□□□□ 0.42
SNX11-201ENST00000359238 ZDHHC21Q8IVQ6 265 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 FAM109AQ8N4B1 249 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 NETO1Q8TDF5 533 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 MSANTD3Q96H12 275 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 INSM2Q96T92 566 aaPredicted RBP17.67■□□□□ 0.42
SNX11-201ENST00000359238 SLC30A2Q9BRI3 323 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 INPP5KQ9BT40 448 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 RASSF1Q9NS23 344 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 SPATA6Q9NWH7 488 aaPredicted RBP17.67■□□□□ 0.42
SNX11-201ENST00000359238 A0A0G2JMP0 313 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 MEIOCA2RUB1 952 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 YY2O15391 372 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 EML2O95834 649 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 IL7P13232 177 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 CDKN2CP42773 168 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 OR3A3P47888 321 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 RPS13P62277 151 aaKnown RBP17.67■□□□□ 0.42
SNX11-201ENST00000359238 SLBPQ14493 270 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNX11-201ENST00000359238 LINC01555Q8NAE3 123 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 GPR156Q8NFN8 814 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 APH1BQ8WW43 257 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 C11orf24Q96F05 449 aaPredicted RBP17.67■□□□□ 0.42
SNX11-201ENST00000359238 BTBD1Q9H0C5 482 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 DIABLOQ9NR28 239 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 GPRC5BQ9NZH0 403 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 KCNN3Q9UGI6 736 aa17.67■□□□□ 0.42
SNX11-201ENST00000359238 LOC100506127A0A0U1RQW1 187 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 H0YIV9 168 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 PCDHGA12O60330 932 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 HTR2BP41595 481 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 RFX2P48378 723 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 CACHD1Q5VU97 1274 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 ATG9BQ674R7 924 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 OR2T5Q6IEZ7 315 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 CHCHD4Q8N4Q1 142 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 OR2T29Q8NH02 315 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 SLC7A6Q92536 515 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 NACC2Q96BF6 587 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 CMTM7Q96FZ5 175 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 ZBTB18Q99592 522 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 APOOQ9BUR5 198 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 C1QTNF7Q9BXJ2 289 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 XKR8Q9H6D3 395 aa17.66■□□□□ 0.42
SNX11-201ENST00000359238 LMAN1LQ9HAT1 526 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms