RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ZNF780BQ9Y6R6 833 aa16.07■□□□□ 0.16
TPM1-205ENST00000357980 FLRT2O43155 660 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 KRT75O95678 551 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 POLE2P56282 527 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 PRR23CQ6ZRP0 262 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 RNF130Q86XS8 419 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 CCDC116Q8IYX3 515 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 SAMD14Q8IZD0 417 aaPredicted RBP16.06■□□□□ 0.16
TPM1-205ENST00000357980 OR4K14Q8NGD5 310 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 OR52E4Q8NGH9 312 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 SLCO4A1Q96BD0 722 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 ZNF501Q96CX3 271 aaPredicted RBP16.06■□□□□ 0.16
TPM1-205ENST00000357980 CLK4Q9HAZ1 481 aaKnown RBP16.06■□□□□ 0.16
TPM1-205ENST00000357980 FGF21Q9NSA1 209 aa16.06■□□□□ 0.16
TPM1-205ENST00000357980 ASCC3Q8N3C0 2202 aaKnown RBP16.06■□□□□ 0.16
TPM1-205ENST00000357980 FAM227AF5H4B4 570 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 CXCR6O00574 342 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 NTN3O00634 580 aaPredicted RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 TNFRSF21O75509 655 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 ZNF806P0C7X5 589 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 ETFAP13804 333 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 CKMT2P17540 419 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 MPIP34949 423 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 ITGA1P56199 1179 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 SLC34A1Q06495 639 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 C16orf72Q14CZ0 275 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 VMACQ2NL98 169 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 ERICH5Q6P6B1 374 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 ANGPTL8Q6UXH0 198 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 TMEM64Q6YI46 380 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 FIG4Q92562 907 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 CNDP2Q96KP4 475 aaKnown RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 NSMCE2Q96MF7 247 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 RAD21L1Q9H4I0 556 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 CUTCQ9NTM9 273 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 TMEM184BQ9Y519 407 aaPredicted RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 COL27A1Q8IZC6 1860 aaPredicted RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 H0YIG0 161 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 CDX4O14627 284 aaPredicted RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 GSTA4O15217 222 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 NUDT7P0C024 238 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 BMP2P12643 396 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 RNH1P13489 461 aaKnown RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 SLC7A1P30825 629 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 PTGER1P34995 402 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 CCT3P49368 545 aaKnown RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 XKP51811 444 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 FOLH1Q04609 750 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 SF3A2Q15428 464 aaKnown RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 FAM214AQ32MH5 1076 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 MTX3Q5HYI7 312 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 IRAK1BP1Q5VVH5 260 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 TLDC1Q6P9B6 456 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 ADGRG5Q8IZF4 528 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 LRRC25Q8N386 305 aaPredicted RBP16.05■□□□□ 0.16
TPM1-205ENST00000357980 RCBTB1Q8NDN9 531 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 CANT1Q8WVQ1 401 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 TANKQ92844 425 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 CCDC74BQ96LY2 380 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 HCN3Q9P1Z3 774 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 RAPGEFL1Q9UHV5 662 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 ANGPTL2Q9UKU9 493 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 HCN4Q9Y3Q4 1203 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 MAP4K5Q9Y4K4 846 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 FER1L5A0AVI2 2057 aa16.05■□□□□ 0.16
TPM1-205ENST00000357980 DHRS12A0PJE2 317 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 D6RAR5 112 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 FGF17O60258 216 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 CREG1O75629 220 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 LDOC1O95751 146 aaPredicted RBP16.04■□□□□ 0.16
TPM1-205ENST00000357980 ACP1P24666 158 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 GPC1P35052 558 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 CRATP43155 626 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 CASP9P55211 416 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 SLITRK4Q8IW52 837 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 OR4N5Q8IXE1 308 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 GPR135Q8IZ08 494 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 OR9A2Q8NGT5 310 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 SFXN5Q8TD22 340 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 MVB12AQ96EY5 273 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 MMABQ96EY8 250 aaPredicted RBP16.04■□□□□ 0.16
TPM1-205ENST00000357980 GFM1Q96RP9 751 aaKnown RBP16.04■□□□□ 0.16
TPM1-205ENST00000357980 SYNDIG1Q9H7V2 258 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 SEMA3GQ9NS98 782 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 CCM2LQ9NUG4 571 aaPredicted RBP16.04■□□□□ 0.16
TPM1-205ENST00000357980 SERTAD3Q9UJW9 196 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 CLCA2Q9UQC9 943 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 AP4S1Q9Y587 144 aa16.04■□□□□ 0.16
TPM1-205ENST00000357980 ZNF749O43361 778 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 LDB3O75112 727 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 GMNNO75496 209 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 GPR75O95800 540 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 BAG2O95816 211 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 GPIP06744 558 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 GP1BAP07359 652 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 CPMP14384 443 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 AVPR1BP47901 424 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 SESN3P58005 492 aa16.03■□□□□ 0.16
TPM1-205ENST00000357980 MAT1AQ00266 395 aaKnown RBP16.03■□□□□ 0.16
TPM1-205ENST00000357980 VEZF1Q14119 521 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms