RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 NTN1O95631 604 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 RFX3P48380 749 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 IL5RAQ01344 420 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 RPL6Q02878 288 aaKnown RBP16.67■□□□□ 0.26
NPAS3-202ENST00000356141 HHEXQ03014 270 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 CCDC92Q53HC0 331 aaPredicted RBP16.67■□□□□ 0.26
NPAS3-202ENST00000356141 BPIFB6Q8NFQ5 453 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 LMX1AQ8TE12 382 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 KLHDC7BQ96G42 594 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 SCARF2Q96GP6 870 aaPredicted RBP16.67■□□□□ 0.26
NPAS3-202ENST00000356141 KCNC2Q96PR1 638 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 OSBPL10Q9BXB5 764 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 CCDC90BQ9GZT6 254 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 TMEFF2Q9UIK5 374 aaPredicted RBP16.67■□□□□ 0.26
NPAS3-202ENST00000356141 DOLKQ9UPQ8 538 aa16.67■□□□□ 0.26
NPAS3-202ENST00000356141 TMX2-CTNND1H3BSU7 103 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 NDUFS2O75306 463 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 TEAD1P28347 426 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 FMO3P31513 532 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 SMN1Q16637 294 aaKnown RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 CTU2Q2VPK5 515 aaKnown RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 C6orf132Q5T0Z8 1188 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 FIGLAQ6QHK4 219 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 FAM92BQ6ZTR7 304 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 ZFP28Q8NHY6 868 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 HLA-CQ95604 372 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 GTPBP3Q969Y2 492 aaKnown RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 OR51I1Q9H343 314 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 FBRSQ9HAH7 460 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 FAM60AQ9NP50 221 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 AMBNQ9NP70 447 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 SLC35C2Q9NQQ7 365 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 PRAMEF27A3QJZ7 478 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 A6NCN8 305 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 ZBTB11O95625 1053 aaPredicted RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 MYF6P23409 242 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 CSNK1EP49674 416 aaKnown RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 PPP2R2BQ00005 443 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 RAPSNQ13702 412 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 NKAIN2Q5VXU1 208 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 FCRL6Q6DN72 434 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 DEF8Q6ZN54 512 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 DCP2Q8IU60 420 aaKnown RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 OR2L5Q8NG80 312 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 OR5K1Q8NHB7 308 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 AMDHD1Q96NU7 426 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 COL21A1Q96P44 957 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 CDX2Q99626 313 aaPredicted RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 DDX31Q9H8H2 851 aaKnown RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 REEP1Q9H902 201 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 CLK4Q9HAZ1 481 aaKnown RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 DDX18Q9NVP1 670 aaKnown RBP16.66■□□□□ 0.26
NPAS3-202ENST00000356141 OR6C2Q9NZP2 312 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 UNC13CQ8NB66 2214 aa16.66■□□□□ 0.26
NPAS3-202ENST00000356141 SPTY2D1-AS1A0A0U1RR47 76 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 TMEM221A6NGB7 291 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 CLCN2P51788 898 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 HOXC5Q00444 222 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 HSPA12BQ96MM6 686 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 LRRC61Q9BV99 259 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 RAB11FIP5Q9BXF6 653 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ZNF696Q9H7X3 374 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ANKMY1Q9P2S6 941 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 IGHV1OR15-9A0A0B4J2B8 117 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 UQCRC2P22695 453 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 HNRNPFP52597 415 aaKnown RBP16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ADARB1P78563 741 aaKnown RBP16.65■□□□□ 0.26
NPAS3-202ENST00000356141 LSM11P83369 360 aaKnown RBP eCLIP16.65■□□□□ 0.26
NPAS3-202ENST00000356141 SNAP47Q5SQN1 464 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ERICH5Q6P6B1 374 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 NANOGNBQ7Z5D8 188 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ASPGQ86U10 573 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 COMTD1Q86VU5 262 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 PAQR7Q86WK9 346 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 AVL9Q8NBF6 648 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ZDHHC1Q8WTX9 485 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ZG16BQ96DA0 208 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 DOHHQ9BU89 302 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 NDUFAF4Q9P032 175 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ZNF639Q9UID6 485 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 CLCA2Q9UQC9 943 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ASB4Q9Y574 426 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 HEBP2Q9Y5Z4 205 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 AP1M2Q9Y6Q5 423 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 TTC28Q96AY4 2481 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 HMGN4O00479 90 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 SEMA3DO95025 777 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 FOSL2P15408 326 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 PCGF2P35227 344 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 RABIFP47224 123 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 C21orf58P58505 322 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 DMWDQ09019 674 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ERV3-1Q14264 604 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ZNF425Q6IV72 752 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 PACRGLQ8N7B6 248 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ZBTB8BQ8NAP8 495 aaPredicted RBP16.65■□□□□ 0.26
NPAS3-202ENST00000356141 ZBED6CLQ96FA7 236 aaPredicted RBP16.65■□□□□ 0.26
NPAS3-202ENST00000356141 METTL2AQ96IZ6 378 aaKnown RBP16.65■□□□□ 0.26
NPAS3-202ENST00000356141 C7orf34Q96L11 122 aa16.65■□□□□ 0.26
NPAS3-202ENST00000356141 FSCN3Q9NQT6 498 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms