RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ITGB5P18084 799 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 HERVK_113P63132 956 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ZC3HC1Q86WB0 502 aaKnown RBP16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ERVK-6Q9BXR3 956 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 L2HGDHQ9H9P8 463 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 UNC13CQ8NB66 2214 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 J3KR12 359 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ALOX15BO15296 676 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 IFNA1P01562 189 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 LCATP04180 440 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 SQSTM1Q13501 440 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 GBX1Q14549 363 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 NT5DC1Q5TFE4 455 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 CDHR3Q6ZTQ4 885 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 TPRA1Q86W33 373 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 C1orf127Q8N9H9 656 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 FCGR1BQ92637 280 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 AKTIPQ9H8T0 292 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 KCNMB3Q9NPA1 279 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 THUMPD1Q9NXG2 353 aaKnown RBP16.57■□□□□ 0.24
COL27A1-201ENST00000356083 TSPAN6O43657 245 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ADH1BP00325 375 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 P2RX1P51575 399 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 HNRNPA0Q13151 305 aaKnown RBP16.57■□□□□ 0.24
COL27A1-201ENST00000356083 MOGSQ13724 837 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 BTBD16Q32M84 506 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ZDHHC1Q8WTX9 485 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 MSANTD3Q96H12 275 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 KREMEN1Q96MU8 473 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 E9PI62 339 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ZNF28P17035 718 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 HERC3Q15034 1050 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ZNF765Q7L2R6 523 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 SLC22A16Q86VW1 577 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 OR2A12Q8NGT7 310 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 OR56A3Q8NH54 315 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 LRRC3Q9BY71 257 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ACTL8Q9H568 366 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 LCMT2O60294 686 aaKnown RBP16.57■□□□□ 0.24
COL27A1-201ENST00000356083 GLSO94925 669 aaPredicted RBP16.57■□□□□ 0.24
COL27A1-201ENST00000356083 RHOP08100 348 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 C6orf132Q5T0Z8 1188 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 RHBDD1Q8TEB9 315 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 CA5BQ9Y2D0 317 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 USP2O75604 605 aaPredicted RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ASGR2P07307 311 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 OXTRP30559 389 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ACVRL1P37023 503 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 STT3AP46977 705 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 TAS2R39P59534 338 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 RHDQ02161 417 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 MEX3BQ6ZN04 569 aaKnown RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 TICAM1Q8IUC6 712 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 RSPRY1Q96DX4 576 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 DIP2AQ14689 1571 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 OR8U9P0C7N5 309 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 CDKN2BP42772 138 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 HTD2P86397 168 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ABHD15Q6UXT9 468 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 PDSS2Q86YH6 399 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 NUP43Q8NFH3 380 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 URM1Q9BTM9 101 aaKnown RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 G6PC3Q9BUM1 346 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 POLE4Q9NR33 117 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 CILPO75339 1184 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 C4BPAP04003 597 aaKnown RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 CHRM4P08173 479 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ALDH3B1P43353 468 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 DUOXA1Q1HG43 343 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 MYLK3Q32MK0 819 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 HSD17B12Q53GQ0 312 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 DAZLQ92904 295 aaKnown RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 KLHL42Q9P2K6 505 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 SRRM3A6NNA2 597 aaPredicted RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 OPN1LWP04000 364 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 YES1P07947 543 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 KCNQ1P51787 676 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 GPATCH2Q9NW75 528 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 MGAT4CQ9UBM8 478 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 DNAJB9Q9UBS3 223 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ST14Q9Y5Y6 855 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 RAB27BO00194 218 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 FLRT2O43155 660 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ERVK-8P63133 956 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 HYAL4Q2M3T9 481 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 RPS27LQ71UM5 84 aaKnown RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM80Q96HE8 168 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 TSNAXQ99598 290 aaKnown RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 DLGAP4Q9Y2H0 992 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 CAPN3P20807 821 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 PTAFRP25105 342 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM115Q12893 351 aaPredicted RBP16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ANKRD22Q5VYY1 191 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 ROPN1LQ96C74 230 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 PYURFQ96I23 114 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM246Q9BRR3 403 aa16.56■□□□□ 0.24
COL27A1-201ENST00000356083 HTR3BO95264 441 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 TIMP2P16035 220 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms