RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 TMEM25Q86YD3 366 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 TSPEARQ8WU66 669 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 NKX1-2Q9UD57 310 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 UNC50Q53HI1 259 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 RPL13AP3Q6NVV1 102 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 FIGNL1Q6PIW4 674 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 C6orf120Q7Z4R8 191 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 TREML1Q86YW5 311 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 OR8K5Q8NH50 307 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 KCNN1Q92952 543 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 PGAM5Q96HS1 289 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 SLC30A2Q9BRI3 323 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF701Q9NV72 531 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 SEC14L4Q9UDX3 406 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 COL1A1P02452 1464 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 PRKCAP17252 672 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 RPS26P62854 115 aaKnown RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 CRYZQ08257 329 aaKnown RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 SLC10A2Q12908 348 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 HNRNPA0Q13151 305 aaKnown RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF517Q6ZMY9 492 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 LAS2Q8IYD9 372 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 NLGN4XQ8N0W4 816 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 POGLUT1Q8NBL1 392 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 GALNT11Q8NCW6 608 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 DNAAF1Q8NEP3 725 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ELP5Q8TE02 316 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ABHD5Q8WTS1 349 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 TMEM184CQ9NVA4 438 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 FBXL3Q9UKT7 428 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 CLEC4EQ9ULY5 219 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 DHDHQ9UQ10 334 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 NPC1O15118 1278 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ANXA3P12429 323 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 DRD2P14416 443 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 CELP19835 753 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 AK4P27144 223 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 GNRHRP30968 328 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 CHRFAM7AQ494W8 412 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 RAB12Q6IQ22 244 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ABCB7O75027 752 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 IFNA7P01567 189 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 P04436 131 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ADRB3P13945 408 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 STOMP27105 288 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 MAGEA2P43356 314 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF404Q494X3 552 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 RUNDC3AQ59EK9 446 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 WDTC1Q8N5D0 677 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 HUS1BQ8NHY5 278 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 FAM3CQ92520 227 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 FN3KQ9H479 309 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 TREM1Q9NP99 234 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 J3QRK9 145 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 TSPAN4O14817 238 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 APOL3O95236 402 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 GGT2P36268 569 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 SPINT3P49223 89 aa17.25■□□□□ 0.35
COL18A1-202ENST00000355480 ATXN7L1Q9ULK2 861 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-202ENST00000355480 SDHDO14521 159 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 HRGP04196 525 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 GALK2Q01415 458 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 GSTM4Q03013 218 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 NFE2L1Q14494 772 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 CLCA4Q14CN2 919 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 NSDHLQ15738 373 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF773Q6PK81 442 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 CRTC1Q6UUV9 634 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 PROKR1Q8TCW9 393 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 DIO2Q92813 273 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 RORAP35398 523 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 DPP6P42658 865 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 RABIFP47224 123 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 RAB33AQ14088 237 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 GRM7Q14831 915 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 UGT3A2Q3SY77 523 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 FBXO46Q6PJ61 603 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-202ENST00000355480 RAB11FIP2Q7L804 512 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 LRRC20Q8TCA0 184 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 SGTBQ96EQ0 304 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 HERPUD2Q9BSE4 406 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF350Q9GZX5 532 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 MTMR10Q9NXD2 777 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 NUFIP1Q9UHK0 495 aaKnown RBP17.24■□□□□ 0.35
COL18A1-202ENST00000355480 TMPRSS11EQ9UL52 423 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 PTGDR2Q9Y5Y4 395 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 VSTM2BA6NLU5 285 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 LRRN3E7EW58 273 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 CPNE6O95741 557 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 CLIC3O95833 236 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 HOXD8P13378 290 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-202ENST00000355480 BPIP17213 487 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 HSD11B2P80365 405 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 HSD17B12Q53GQ0 312 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 SYCE2Q6PIF2 218 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 LRFN4Q6PJG9 635 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 FIGLAQ6QHK4 219 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 LMO3Q8TAP4 145 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 LRRN3Q9H3W5 708 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms