RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 UTP4Q969X6 686 aaKnown RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 COX4I2Q96KJ9 171 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 TCF12Q99081 682 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 CCDC77Q9BR77 488 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 CNPPD1Q9BV87 410 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 LIN28AQ9H9Z2 209 aaKnown RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 C12orf10Q9HB07 376 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 CCDC177Q9NQR7 707 aaPredicted RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 SAR1AQ9NR31 198 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 BEX4Q9NWD9 120 aaPredicted RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 CRYL1Q9Y2S2 319 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 PCDHA3Q9Y5H8 950 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 KCNE1BA0A087WTH5 132 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 ERI2A8K979 691 aaKnown RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 H3BMM5 538 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 PSMD12O00232 456 aaPredicted RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 SYT5O00445 386 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 ARHGEF9O43307 516 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 HRH2P25021 359 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 HPDP32754 393 aaPredicted RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 GRK3P35626 688 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 TBPL1P62380 186 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 CRADDP78560 199 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 HERC3Q15034 1050 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 RIPPLY2Q5TAB7 128 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 RGS9BPQ6ZS82 235 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 GK5Q6ZS86 529 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 TRILQ7L0X0 811 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 TREML1Q86YW5 311 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 WDR75Q8IWA0 830 aaKnown RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 LRRC34Q8IZ02 419 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 CIARTQ8N365 385 aaPredicted RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 MPP5Q8N3R9 675 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 FAM109AQ8N4B1 249 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 TMEM251Q8N6I4 163 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 RELL2Q8NC24 303 aaPredicted RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 NFAM1Q8NET5 270 aaPredicted RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 ATL1Q8WXF7 558 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 RNASE6Q93091 150 aaKnown RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 EME1Q96AY2 570 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 SARAFQ96BY9 339 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 MPP4Q96JB8 637 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 ZDHHC11Q9H8X9 412 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 NECTIN3Q9NQS3 549 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 PNO1Q9NRX1 252 aaKnown RBP10.38□□□□□ -0.75
RTN3-204ENST00000354497 NFU1Q9UMS0 254 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 TSC22D4Q9Y3Q8 395 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 SLC22A7Q9Y694 548 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 AKAP6Q13023 2319 aa10.38□□□□□ -0.75
RTN3-204ENST00000354497 NSD1Q96L73 2696 aaPredicted RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 PHF3Q92576 2039 aaKnown RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 TUBAL3A6NHL2 446 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 HSPB2A8KAH6 182 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 AQP7O14520 342 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 DVL2O14641 736 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 PFDN6O15212 129 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 LCMT2O60294 686 aaKnown RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 GALR3O60755 368 aaPredicted RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 OR6B1O95007 311 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 OXSR1O95747 527 aaPredicted RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 IFNB1P01574 187 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 CELA3AP09093 270 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 IMPA1P29218 277 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 CRABP2P29373 138 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 HMOX2P30519 316 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 PHBP35232 272 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 RPL5P46777 297 aaKnown RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 ARFIP2P53365 341 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 SKP1P63208 163 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 MEF2AQ02078 507 aaPredicted RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 GBX1Q14549 363 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 DAZAP2Q15038 168 aaPredicted RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 HSPB2Q16082 182 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 PCID2Q5JVF3 399 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 HECTD2Q5U5R9 776 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 MRNIPQ6NTE8 343 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 BRICD5Q6PL45 260 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 LRRC74BQ6ZQY2 392 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 QSOX2Q6ZRP7 698 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 C17orf64Q86WR6 236 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 SLC13A5Q86YT5 568 aaPredicted RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 ZNF740Q8NDX6 193 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 B3GNT7Q8NFL0 401 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 LINC01560Q8TB33 94 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 LPGAT1Q92604 370 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 NCLNQ969V3 563 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 TM4SF19Q96DZ7 209 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 CAPZA3Q96KX2 299 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 Q96MF0 132 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 PRDM9Q9NQV7 894 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 MTRF1LQ9UGC7 380 aaKnown RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 SH2B3Q9UQQ2 575 aa10.37□□□□□ -0.75
RTN3-204ENST00000354497 YARS2Q9Y2Z4 477 aaKnown RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 NOSIPQ9Y314 301 aaKnown RBP10.37□□□□□ -0.75
RTN3-204ENST00000354497 TCRBV16S1A1N1A0A5B0 115 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 CLCA1A8K7I4 914 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 OR1F1O43749 312 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ZBTB14O43829 449 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 OR2J2O76002 312 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms