RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 NRG1Q02297 640 aaPredicted RBP12.13□□□□□ -0.47
COL6A3-203ENST00000353578 RSU1Q15404 277 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.13□□□□□ -0.47
COL6A3-203ENST00000353578 FOXRED2Q8IWF2 684 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 FNDC9Q8TBE3 224 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 ABRACLQ9P1F3 81 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
COL6A3-203ENST00000353578 CLTCQ00610 1675 aaKnown RBP12.13□□□□□ -0.47
COL6A3-203ENST00000353578 IFNGR1P15260 489 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 ATXN7L3Q14CW9 347 aaPredicted RBP12.13□□□□□ -0.47
COL6A3-203ENST00000353578 FAM111BQ6SJ93 734 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 NDUFAF7Q7L592 441 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 RGMAQ96B86 450 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 SPHK1Q9NYA1 384 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 BTBD17A6NE02 478 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
COL6A3-203ENST00000353578 ERAL1O75616 437 aaKnown RBP12.13□□□□□ -0.47
COL6A3-203ENST00000353578 CNR1P21554 472 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 CEACAM19Q7Z692 300 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 FTHL17Q9BXU8 183 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 COPS7AQ9UBW8 275 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 GMEB2Q9UKD1 530 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 TNFRSF10BO14763 440 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 GGT1P19440 569 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 PRSS3P35030 304 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 GPR143P51810 404 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 SPIN3Q5JUX0 258 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 LDB1Q86U70 411 aaPredicted RBP12.13□□□□□ -0.47
COL6A3-203ENST00000353578 LIX1LQ8IVB5 337 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 GPR151Q8TDV0 419 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 SORCS1Q8WY21 1168 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 IL26Q9NPH9 171 aa12.13□□□□□ -0.47
COL6A3-203ENST00000353578 A8MT66 165 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 TMEM63AO94886 807 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 AMHR2Q16671 573 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 PIGBQ92521 554 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 MARC2Q969Z3 335 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 CD48P09326 243 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ALPPL2P10696 532 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 CYP2B6P20813 491 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 MTNR1AP48039 350 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 CCR8P51685 355 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 TAS2R19P59542 299 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 SNAPC2Q13487 334 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 V9GYS6 101 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 A0A0G2JN53 185 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 METTL15P1P0C7V9 234 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 AMY2BP19961 511 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ADRA1BP35368 520 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 RPL23AP62750 156 aaKnown RBP12.12□□□□□ -0.47
COL6A3-203ENST00000353578 OR13F1Q8NGS4 319 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 MOB1AQ9H8S9 216 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ASXL3Q9C0F0 2248 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 LACTBL1A8MY62 500 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ANGPTL7O43827 346 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 STAG3L2P0CL84 134 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 RCAN2Q14206 197 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ANKRD46Q86W74 232 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 AGBL3Q8NEM8 1001 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 EDEM1Q92611 657 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ZBTB20Q9HC78 741 aaPredicted RBP12.12□□□□□ -0.47
COL6A3-203ENST00000353578 SPTBP11277 2137 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 SOCS2O14508 198 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 HRGP04196 525 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF155Q12901 538 aaPredicted RBP12.12□□□□□ -0.47
COL6A3-203ENST00000353578 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF546Q86UE3 836 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 MON1AQ86VX9 555 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 OR56A3Q8NH54 315 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 PAPOLGQ9BWT3 736 aaKnown RBP12.12□□□□□ -0.47
COL6A3-203ENST00000353578 AMBNQ9NP70 447 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 MON2Q7Z3U7 1717 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 JUNBP17275 347 aaPredicted RBP12.12□□□□□ -0.47
COL6A3-203ENST00000353578 ALG1LQ6GMV1 187 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 UNC5DQ6UXZ4 953 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 OR10K1Q8NGX5 313 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 TRAPPC12Q8WVT3 735 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 OR1G1P47890 313 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 TAS2R39P59534 338 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 CCINQ13939 588 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 PHYKPLQ8IUZ5 450 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 C5orf34Q96MH7 638 aa12.12□□□□□ -0.47
COL6A3-203ENST00000353578 GMPR2Q9P2T1 348 aaKnown RBP12.12□□□□□ -0.47
COL6A3-203ENST00000353578 C1QTNF3-AMACRE9PGA6 284 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 MAFKO60675 156 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 FAM155BO75949 473 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 UBE2KP61086 200 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 SORDQ00796 357 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
COL6A3-203ENST00000353578 ADIPOR2Q86V24 386 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 PHYHIPQ92561 330 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 SLC28A3Q9HAS3 691 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 ZDHHC4Q9NPG8 344 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 TGFB1P01137 390 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 CD3GP09693 182 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 CD9P21926 228 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 SLC5A2P31639 672 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 MC3RP41968 323 aa12.11□□□□□ -0.47
COL6A3-203ENST00000353578 EIF2B1Q14232 305 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms