RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 MARCH9Q86YJ5 346 aa16.96■□□□□ 0.31
APP-202ENST00000348990 UFD1Q92890 307 aa16.96■□□□□ 0.31
APP-202ENST00000348990 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.31
APP-202ENST00000348990 SORBS1Q9BX66 1292 aaKnown RBP16.96■□□□□ 0.31
APP-202ENST00000348990 ZNF624Q9P2J8 865 aaPredicted RBP16.96■□□□□ 0.31
APP-202ENST00000348990 TRPC4Q9UBN4 977 aa16.96■□□□□ 0.31
APP-202ENST00000348990 SEC14L3Q9UDX4 400 aa16.96■□□□□ 0.31
APP-202ENST00000348990 KLHL21Q9UJP4 597 aa16.96■□□□□ 0.31
APP-202ENST00000348990 C2orf92A0A1B0GVN3 265 aa16.95■□□□□ 0.3
APP-202ENST00000348990 VNN2O95498 520 aa16.95■□□□□ 0.3
APP-202ENST00000348990 ADAP00813 363 aa16.95■□□□□ 0.3
APP-202ENST00000348990 ZNF8P17098 575 aaPredicted RBP16.95■□□□□ 0.3
APP-202ENST00000348990 HLA-DMAP28067 261 aa16.95■□□□□ 0.3
APP-202ENST00000348990 HSPB3Q12988 150 aa16.95■□□□□ 0.3
APP-202ENST00000348990 ANKRD54Q6NXT1 300 aa16.95■□□□□ 0.3
APP-202ENST00000348990 CPA6Q8N4T0 437 aa16.95■□□□□ 0.3
APP-202ENST00000348990 SPERTQ8NA61 448 aa16.95■□□□□ 0.3
APP-202ENST00000348990 TMEM145Q8NBT3 493 aa16.95■□□□□ 0.3
APP-202ENST00000348990 FBXO22Q8NEZ5 403 aa16.95■□□□□ 0.3
APP-202ENST00000348990 NEIL2Q969S2 332 aa16.95■□□□□ 0.3
APP-202ENST00000348990 REPS1Q96D71 796 aa16.95■□□□□ 0.3
APP-202ENST00000348990 MED28Q9H204 178 aa16.95■□□□□ 0.3
APP-202ENST00000348990 LRFN2Q9ULH4 789 aa16.95■□□□□ 0.3
APP-202ENST00000348990 RFXAPO00287 272 aa16.95■□□□□ 0.3
APP-202ENST00000348990 CH25HO95992 272 aa16.95■□□□□ 0.3
APP-202ENST00000348990 CELP19835 753 aa16.95■□□□□ 0.3
APP-202ENST00000348990 MVDP53602 400 aa16.95■□□□□ 0.3
APP-202ENST00000348990 SLBPQ14493 270 aaKnown RBP eCLIP16.95■□□□□ 0.3
APP-202ENST00000348990 ZNF267Q14586 743 aaPredicted RBP16.95■□□□□ 0.3
APP-202ENST00000348990 ESCO2Q56NI9 601 aa16.95■□□□□ 0.3
APP-202ENST00000348990 CRB2Q5IJ48 1285 aa16.95■□□□□ 0.3
APP-202ENST00000348990 CDKL4Q5MAI5 379 aa16.95■□□□□ 0.3
APP-202ENST00000348990 TCTE3Q8IZS6 198 aa16.95■□□□□ 0.3
APP-202ENST00000348990 LRRC17Q8N6Y2 441 aa16.95■□□□□ 0.3
APP-202ENST00000348990 ARL14EPQ8N8R7 260 aaPredicted RBP16.95■□□□□ 0.3
APP-202ENST00000348990 OR6C4Q8NGE1 309 aa16.95■□□□□ 0.3
APP-202ENST00000348990 TM9SF4Q92544 642 aa16.95■□□□□ 0.3
APP-202ENST00000348990 CLEC4AQ9UMR7 237 aa16.95■□□□□ 0.3
APP-202ENST00000348990 LSM2Q9Y333 95 aaKnown RBP16.95■□□□□ 0.3
APP-202ENST00000348990 BRCA2P51587 3418 aa16.95■□□□□ 0.3
APP-202ENST00000348990 CKAP5Q14008 2032 aa16.95■□□□□ 0.3
APP-202ENST00000348990 FFAR1O14842 300 aa16.95■□□□□ 0.3
APP-202ENST00000348990 FABP7O15540 132 aa16.95■□□□□ 0.3
APP-202ENST00000348990 PCSK2P16519 638 aa16.95■□□□□ 0.3
APP-202ENST00000348990 RRAS2P62070 204 aaPredicted RBP16.95■□□□□ 0.3
APP-202ENST00000348990 PUM1Q14671 1186 aaKnown RBP eCLIP16.95■□□□□ 0.3
APP-202ENST00000348990 LAS2Q8IYD9 372 aa16.95■□□□□ 0.3
APP-202ENST00000348990 GHDCQ8N2G8 530 aa16.95■□□□□ 0.3
APP-202ENST00000348990 CLDN22Q8N7P3 220 aa16.95■□□□□ 0.3
APP-202ENST00000348990 OR52I1Q8NGK6 324 aa16.95■□□□□ 0.3
APP-202ENST00000348990 ZNF431Q8TF32 576 aaPredicted RBP16.95■□□□□ 0.3
APP-202ENST00000348990 BTN2A2Q8WVV5 523 aa16.95■□□□□ 0.3
APP-202ENST00000348990 UPRTQ96BW1 309 aa16.95■□□□□ 0.3
APP-202ENST00000348990 HHIPQ96QV1 700 aa16.95■□□□□ 0.3
APP-202ENST00000348990 C5AR2Q9P296 337 aa16.95■□□□□ 0.3
APP-202ENST00000348990 ATP6V1HQ9UI12 483 aa16.95■□□□□ 0.3
APP-202ENST00000348990 Q9Y3F1 56 aa16.95■□□□□ 0.3
APP-202ENST00000348990 HEPACAM2A8MVW5 462 aa16.94■□□□□ 0.3
APP-202ENST00000348990 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
APP-202ENST00000348990 SLC11A1P49279 550 aa16.94■□□□□ 0.3
APP-202ENST00000348990 MANFP55145 182 aaKnown RBP16.94■□□□□ 0.3
APP-202ENST00000348990 OLIG3Q7RTU3 272 aa16.94■□□□□ 0.3
APP-202ENST00000348990 TMEM173Q86WV6 379 aaPredicted RBP16.94■□□□□ 0.3
APP-202ENST00000348990 XAGE5Q8WWM1 108 aa16.94■□□□□ 0.3
APP-202ENST00000348990 AKAP1Q92667 903 aaKnown RBP eCLIP16.94■□□□□ 0.3
APP-202ENST00000348990 FOPNLQ96NB1 174 aa16.94■□□□□ 0.3
APP-202ENST00000348990 SLC22A12Q96S37 553 aa16.94■□□□□ 0.3
APP-202ENST00000348990 DHRS9Q9BPW9 319 aa16.94■□□□□ 0.3
APP-202ENST00000348990 SLC25A19Q9HC21 320 aa16.94■□□□□ 0.3
APP-202ENST00000348990 ATP13A2Q9NQ11 1180 aa16.94■□□□□ 0.3
APP-202ENST00000348990 STOX2Q9P2F5 926 aaPredicted RBP16.94■□□□□ 0.3
APP-202ENST00000348990 ING4Q9UNL4 249 aa16.94■□□□□ 0.3
APP-202ENST00000348990 MGAT4BQ9UQ53 548 aa16.94■□□□□ 0.3
APP-202ENST00000348990 PRKAB1Q9Y478 270 aa16.94■□□□□ 0.3
APP-202ENST00000348990 PIPSLA2A3N6 862 aa16.94■□□□□ 0.3
APP-202ENST00000348990 E9PQ18 207 aa16.94■□□□□ 0.3
APP-202ENST00000348990 SLC28A2O43868 658 aa16.94■□□□□ 0.3
APP-202ENST00000348990 PIPP12273 146 aaPredicted RBP16.94■□□□□ 0.3
APP-202ENST00000348990 DGKGP49619 791 aa16.94■□□□□ 0.3
APP-202ENST00000348990 PTSQ03393 145 aa16.94■□□□□ 0.3
APP-202ENST00000348990 BCL2L15Q5TBC7 163 aa16.94■□□□□ 0.3
APP-202ENST00000348990 USP50Q70EL3 339 aaPredicted RBP16.94■□□□□ 0.3
APP-202ENST00000348990 GPR155Q7Z3F1 870 aa16.94■□□□□ 0.3
APP-202ENST00000348990 DCAF4L2Q8NA75 395 aa16.94■□□□□ 0.3
APP-202ENST00000348990 TRPV1Q8NER1 839 aa16.94■□□□□ 0.3
APP-202ENST00000348990 MSANTD3Q96H12 275 aa16.94■□□□□ 0.3
APP-202ENST00000348990 MAGEB10Q96LZ2 347 aaPredicted RBP16.94■□□□□ 0.3
APP-202ENST00000348990 OR4K3Q96R72 315 aa16.94■□□□□ 0.3
APP-202ENST00000348990 FNDC11Q9BVV2 318 aa16.94■□□□□ 0.3
APP-202ENST00000348990 BHLHE41Q9C0J9 482 aaPredicted RBP16.94■□□□□ 0.3
APP-202ENST00000348990 ZNF224Q9NZL3 707 aa16.94■□□□□ 0.3
APP-202ENST00000348990 CD8B2A6NJW9 211 aa16.94■□□□□ 0.3
APP-202ENST00000348990 IL3P08700 152 aa16.94■□□□□ 0.3
APP-202ENST00000348990 CD8BP10966 210 aa16.94■□□□□ 0.3
APP-202ENST00000348990 SDHBP21912 280 aa16.94■□□□□ 0.3
APP-202ENST00000348990 LHCGRP22888 699 aa16.94■□□□□ 0.3
APP-202ENST00000348990 PKLRP30613 574 aa16.94■□□□□ 0.3
APP-202ENST00000348990 WNT4P56705 351 aa16.94■□□□□ 0.3
APP-202ENST00000348990 PPP3R1P63098 170 aa16.94■□□□□ 0.3
APP-202ENST00000348990 C19orf57Q0VDD7 668 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms