RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 GADD45GO95257 159 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 PCGF2P35227 344 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 BCL2L1Q07817 233 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF730Q6ZMV8 503 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF366Q8N895 744 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 PROKR2Q8NFJ6 384 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 UBTD2Q8WUN7 234 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 TMEM43Q9BTV4 400 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 FZD3Q9NPG1 666 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 ING4Q9UNL4 249 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 ALPK3Q96L96 1907 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 TRBV5-4A0A0C4DH59 114 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF821O75541 412 aaPredicted RBP17.75■□□□□ 0.43
SCARF1-202ENST00000348987 RAF1P04049 648 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 LHCGRP22888 699 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 DBPQ10586 325 aaPredicted RBP17.75■□□□□ 0.43
SCARF1-202ENST00000348987 FGFBP1Q14512 234 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 COX20Q5RI15 118 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF57Q68EA5 555 aaPredicted RBP17.75■□□□□ 0.43
SCARF1-202ENST00000348987 KIAA1324Q6UXG2 1013 aaKnown RBP17.75■□□□□ 0.43
SCARF1-202ENST00000348987 DNAJC5GQ8N7S2 189 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 OR11H4Q8NGC9 324 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 OR8J2Q8NGG1 315 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF461Q8TAF7 563 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 SLC6A18Q96N87 628 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 TM9SF2Q99805 663 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 SLC32A1Q9H598 525 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 HEXA-AS1Q9H8Q6 139 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 NMNAT1Q9HAN9 279 aaPredicted RBP17.75■□□□□ 0.43
SCARF1-202ENST00000348987 LIN7BQ9HAP6 207 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 SLC28A3Q9HAS3 691 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 FAM120CQ9NX05 1096 aaKnown RBP17.75■□□□□ 0.43
SCARF1-202ENST00000348987 SCML1Q9UN30 329 aa17.75■□□□□ 0.43
SCARF1-202ENST00000348987 UNC80Q8N2C7 3258 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 A0A0A6YYJ9 748 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 CHP2O43745 196 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 ETFAP13804 333 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF91Q05481 1191 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 MPPE1Q53F39 396 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 KLHL22Q53GT1 634 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 TYW3Q6IPR3 259 aaKnown RBP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 PRSS42Q7Z5A4 293 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 DNAJB7Q7Z6W7 309 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 NXPE1Q8N323 547 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 OR6C4Q8NGE1 309 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 CSGALNACT1Q8TDX6 532 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 OVCA2Q8WZ82 227 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 VOPP1Q96AW1 172 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 SAMD11Q96NU1 681 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 DUSP26Q9BV47 211 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 DPCDQ9BVM2 203 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 GPBP1L1Q9HC44 474 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 ARL15Q9NXU5 204 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 SPIN1Q9Y657 262 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 C1orf226A1L170 272 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 AKAP8O43823 692 aaKnown RBP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 RPIAP49247 311 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 STK19P49842 368 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 AP1S1P61966 158 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 B4GALNT1Q00973 533 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 TEAD4Q15561 434 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 MEDAGQ5VYS4 303 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 AP3S1Q92572 193 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 METTL2AQ96IZ6 378 aaKnown RBP17.74■□□□□ 0.43
SCARF1-202ENST00000348987 TSSK6Q9BXA6 273 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 ZFP64Q9NPA5 681 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF222Q9UK12 451 aa17.74■□□□□ 0.43
SCARF1-202ENST00000348987 KCNE1BA0A087WTH5 132 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 A8MVJ9 347 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 PRAMEF4O60810 478 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 HOXD10P28358 340 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 CCR7P32248 378 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 LIMS1P48059 325 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 RPS25P62851 125 aaKnown RBP17.73■□□□□ 0.43
SCARF1-202ENST00000348987 SF3A2Q15428 464 aaKnown RBP17.73■□□□□ 0.43
SCARF1-202ENST00000348987 SNAPC1Q16533 368 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 SPDYE7PQ495Y7 208 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 CRTC2Q53ET0 693 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-202ENST00000348987 ATAT1Q5SQI0 421 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 PRAMEF9Q5VWM5 478 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 MACC1Q6ZN28 852 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 TPGS1Q6ZTW0 290 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 GHDCQ8N2G8 530 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 DCAF4L2Q8NA75 395 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 SKA2Q8WVK7 121 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-202ENST00000348987 KCNJ15Q99712 375 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 PIP5K1AQ99755 562 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 SOSTQ9BQB4 213 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 PIGUQ9H490 435 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF334Q9HCZ1 680 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-202ENST00000348987 SH3BGRLO75368 114 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 TPOP07202 933 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 ANXA5P08758 320 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 PRPH2P23942 346 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 CTBP2P56545 445 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 PPP3R1P63098 170 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 RPA4Q13156 261 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 DEFB115Q30KQ5 88 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 ATP13A5Q4VNC0 1218 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms