RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CSNK2A2P19784 350 aaPredicted RBP25.42■■□□□ 1.66
SSBP4-202ENST00000348495 FEN1P39748 380 aaKnown RBP25.42■■□□□ 1.66
SSBP4-202ENST00000348495 TRPC1P48995 793 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 GABREP78334 506 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 BTG2P78543 158 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 PLIN5Q00G26 463 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 TRMT5Q32P41 509 aaKnown RBP25.42■■□□□ 1.66
SSBP4-202ENST00000348495 LRIF1Q5T3J3 769 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 MRPL14Q6P1L8 145 aaKnown RBP25.42■■□□□ 1.66
SSBP4-202ENST00000348495 STT3BQ8TCJ2 826 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 ROPN1LQ96C74 230 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 SLC46A1Q96NT5 459 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 PAIP1Q9H074 479 aaKnown RBP25.42■■□□□ 1.66
SSBP4-202ENST00000348495 C1orf21Q9H246 121 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 GLIPR2Q9H4G4 154 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 GIMAP4Q9NUV9 329 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 TAS2R1Q9NYW7 299 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 MMACHCQ9Y4U1 282 aa25.42■■□□□ 1.66
SSBP4-202ENST00000348495 PIEZO1Q92508 2521 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 A0A096LPI6 279 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 OR2W5A6NFC9 320 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 C6orf47O95873 294 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 NPPAP01160 153 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 CPMP14384 443 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 NTSP30990 170 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 CDKN2CP42773 168 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 EFNA3P52797 238 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 HBA1P69905 142 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 ID2Q02363 134 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 CPZQ66K79 652 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 C8orf82Q6P1X6 216 aaPredicted RBP25.41■■□□□ 1.66
SSBP4-202ENST00000348495 QSOX2Q6ZRP7 698 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 TIPARPQ7Z3E1 657 aaKnown RBP25.41■■□□□ 1.66
SSBP4-202ENST00000348495 DNAJB8Q8NHS0 232 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 OR5P2Q8WZ92 322 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 MR1Q95460 341 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 BBS4Q96RK4 519 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 TRIM4Q9C037 500 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 CHST8Q9H2A9 424 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 SLC6A13Q9NSD5 602 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 NEUROG3Q9Y4Z2 214 aa25.41■■□□□ 1.66
SSBP4-202ENST00000348495 RFXANKO14593 260 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 CNOT3O75175 753 aaKnown RBP25.4■■□□□ 1.66
SSBP4-202ENST00000348495 ERN1O75460 977 aaKnown RBP25.4■■□□□ 1.66
SSBP4-202ENST00000348495 ZGLP1P0C6A0 271 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 NCALDP61601 193 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 RHAGQ02094 409 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 OCA2Q04671 838 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 SLC13A2Q13183 592 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 ART3Q13508 389 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 NFYCQ13952 458 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 C6orf10Q5SRN2 563 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 FAM198BQ6UWH4 519 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 C6orf15Q6UXA7 325 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-202ENST00000348495 ZNF551Q7Z340 670 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-202ENST00000348495 PSMA8Q8TAA3 256 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 PANX1Q96RD7 426 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 C14orf105Q9NVL8 296 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 IGKV3D-11A0A0A0MRZ8 115 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 TRBV5-3A0A0A0MS03 114 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 KCNH1O95259 989 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 KRT16P08779 473 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 MAOAP21397 527 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 MPIP34949 423 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 NCBP2P52298 156 aaKnown RBP eCLIP25.4■■□□□ 1.66
SSBP4-202ENST00000348495 MANFP55145 182 aaKnown RBP25.4■■□□□ 1.66
SSBP4-202ENST00000348495 NKG7Q16617 165 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 FAM199XQ6PEV8 388 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-202ENST00000348495 IGF2-ASQ6U949 168 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 DHDDSQ86SQ9 333 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 LAPTM4BQ86VI4 370 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 MSRB3Q8IXL7 192 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 CCDC116Q8IYX3 515 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 LRRC25Q8N386 305 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-202ENST00000348495 LRRC58Q96CX6 371 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 PHF12Q96QT6 1004 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 WDR54Q9H977 334 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 TAS2R9Q9NYW1 312 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 PCDHGA7Q9Y5G6 932 aa25.4■■□□□ 1.66
SSBP4-202ENST00000348495 SDK2Q58EX2 2172 aa25.39■■□□□ 1.66
SSBP4-202ENST00000348495 RECKO95980 971 aa25.39■■□□□ 1.65
SSBP4-202ENST00000348495 PORP16435 677 aaPredicted RBP25.39■■□□□ 1.65
SSBP4-202ENST00000348495 SLC25A3Q00325 362 aa25.39■■□□□ 1.65
SSBP4-202ENST00000348495 GPATCH1Q9BRR8 931 aaKnown RBP25.39■■□□□ 1.65
SSBP4-202ENST00000348495 IL1RL2Q9HB29 575 aa25.39■■□□□ 1.65
SSBP4-202ENST00000348495 NECTIN3Q9NQS3 549 aa25.39■■□□□ 1.65
SSBP4-202ENST00000348495 GID8Q9NWU2 228 aa25.39■■□□□ 1.65
SSBP4-202ENST00000348495 SLC25A37Q9NYZ2 338 aa25.39■■□□□ 1.65
SSBP4-202ENST00000348495 CPSF4O95639 269 aaKnown RBP25.38■■□□□ 1.65
SSBP4-202ENST00000348495 ATP1B1P05026 303 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 ZCCHC18P0CG32 403 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 SLC35E2P0CK97 266 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 PTPN4P29074 926 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 RASSF2P50749 326 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 CAMK2BQ13554 666 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 MAP7Q14244 749 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 MINDY4Q4G0A6 757 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 DNAJC14Q6Y2X3 702 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-202ENST00000348495 OR4A15Q8NGL6 344 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 ZFP28Q8NHY6 868 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms