RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 DGAT2L6Q6ZPD8 337 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 CCDC116Q8IYX3 515 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 CT55Q8WUE5 264 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 FKBP10Q96AY3 582 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 SPSB2Q99619 263 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 DPH2Q9BQC3 489 aaPredicted RBP17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 MESP1Q9BRJ9 268 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 TRIM4Q9C037 500 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 VN1R1Q9GZP7 353 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC26A1Q9H2B4 701 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 ATAD3AQ9NVI7 634 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 FAM120CQ9NX05 1096 aaKnown RBP17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 LEF1Q9UJU2 399 aaPredicted RBP17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 PADI1Q9ULC6 663 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 MRPS33Q9Y291 106 aaKnown RBP17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 PCDHGA7Q9Y5G6 932 aa17.83■□□□□ 0.45
CHMP4A-201ENST00000347519 PRSS51A0A1B0GVH4 220 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 A0A1W2PRB8 838 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 RNASET2O00584 256 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 MRASO14807 208 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 ANGPT2O15123 496 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 CPMP14384 443 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 IL10P22301 178 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 RBMS1P29558 406 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 SOX18P35713 384 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 HSD17B7P56937 341 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 IGLV3-21P80748 117 aaPredicted RBP17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 OCA2Q04671 838 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 LTB4RQ15722 352 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 MAPKAPK3Q16644 382 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 GTDC1Q4AE62 458 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 IGF2-ASQ6U949 168 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 RINLQ6ZS11 566 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 MSANTD1Q6ZTZ1 278 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 PTCHD1Q96NR3 888 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 CCDC115Q96NT0 180 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 AMDHD1Q96NU7 426 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 BBS4Q96RK4 519 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 NRSN2Q9GZP1 204 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 PAIP1Q9H074 479 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 IL1RL2Q9HB29 575 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 PSME2Q9UL46 239 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 ENTPD4Q9Y227 616 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 MAN2B2Q9Y2E5 1009 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 MMACHCQ9Y4U1 282 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 NEUROG3Q9Y4Z2 214 aa17.82■□□□□ 0.44
CHMP4A-201ENST00000347519 IGKV3D-11A0A0A0MRZ8 115 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 DYTNA2CJ06 578 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 BLACEA4D250 179 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 CLDN4O14493 209 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 BRINP1O60477 761 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 RAD1O60671 282 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 ALBP02768 609 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 GSNP06396 782 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 HOXB9P17482 250 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 CSNK2A2P19784 350 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 PTPN6P29350 595 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 CDK9P50750 372 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 NCBP2P52298 156 aaKnown RBP eCLIP17.81■□□□□ 0.443e-20■■□□□ 11.5
CHMP4A-201ENST00000347519 HBA1P69905 142 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 STX5Q13190 355 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 RTP5Q14D33 572 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 NCF4Q15080 339 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 MMEL1Q495T6 779 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 ANXA8L1Q5VT79 327 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 DLEU7Q6UYE1 221 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 DNAJC14Q6Y2X3 702 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 QSOX2Q6ZRP7 698 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 MSRB3Q8IXL7 192 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 PPWD1Q96BP3 646 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 ALOXE3Q9BYJ1 711 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 SIRT3Q9NTG7 399 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 GPN3Q9UHW5 284 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 BTNL2Q9UIR0 455 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 MKL2Q9ULH7 1088 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 ZNF780BQ9Y6R6 833 aa17.81■□□□□ 0.44
CHMP4A-201ENST00000347519 TRABD2BA6NFA1 517 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 BBIP1A8MTZ0 92 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 FXYD1O00168 92 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 ABCB1P08183 1280 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 ADRB1P08588 477 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 PORP16435 677 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 CALB2P22676 271 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 NTSP30990 170 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 MANFP55145 182 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 HSPB3Q12988 150 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 MAP7Q14244 749 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 FAAH2Q6GMR7 532 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 NLGN4XQ8N0W4 816 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 CLEC4FQ8N1N0 589 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 DPP10Q8N608 796 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 AMER2Q8N7J2 671 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 ENDOVQ8N8Q3 282 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 PLPP5Q8NEB5 264 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 ADCY4Q8NFM4 1077 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 NLGN4YQ8NFZ3 816 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 OR4A15Q8NGL6 344 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 OR9A2Q8NGT5 310 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 OR5P2Q8WZ92 322 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 SLC7A6OSQ96CW6 309 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms