RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 TNFRSF11BO00300 401 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 UGT2B11O75310 529 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ZNF888P0CJ79 500 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 C8orf89P0DMQ9 161 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ALPPL2P10696 532 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ITGA2P17301 1181 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CRHBPP24387 322 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SNRPNP63162 240 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 UBE2IP63279 158 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 IL18R1Q13478 541 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RAPSNQ13702 412 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 MAPK11Q15759 364 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RBM48Q5RL73 367 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 C6orf141Q5SZD1 244 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 FCRL6Q6DN72 434 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 FIGLAQ6QHK4 219 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TAF8Q7Z7C8 310 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ZNF687Q8N1G0 1237 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SUN3Q8TAQ9 357 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 NT5CQ8TCD5 201 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 UTP15Q8TED0 518 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SLC37A2Q8TED4 501 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TM4SF19Q96DZ7 209 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 MAGED4Q96JG8 741 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TPSD1Q9BZJ3 242 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GPR27Q9NS67 375 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 EXD2Q9NVH0 621 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 A0A1W2PS29 197 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RYKP34925 604 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 FEN1P39748 380 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CDH12P55289 794 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ESRRGP62508 458 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SPIBQ01892 262 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 DUSP2Q05923 314 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GPR19Q15760 415 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SMAD2Q15796 467 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 OR5D16Q8NGK9 328 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 OR52J3Q8NH60 311 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SLC35G5Q96KT7 338 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 NPLQ9BXD5 320 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 OR51I1Q9H343 314 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ENTPD4Q9Y227 616 aa13.34□□□□□ -0.27
CDK5RAP1-202ENST00000346416 KIR2DS5A0A0G2JLQ3 304 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 A0A0G2JNG1 304 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 J3KTA2 159 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KIR2DS3K7RE56 304 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 P2RX6O15547 441 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RECKO95980 971 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR12D1P0DN82 309 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CTSEP14091 401 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 AGXTP21549 392 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 EPHA2P29317 976 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CLK3P49761 638 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PRKAG1P54619 331 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 DYNC1I2Q13409 638 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 C1orf61Q13536 156 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KIR2DS5Q14953 304 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LAIR2Q6ISS4 152 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KCTD8Q6ZWB6 473 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GPR141Q7Z602 305 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TTC29Q8NA56 475 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 XAGE5Q8WWM1 108 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ORAI3Q9BRQ5 295 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SEMA3GQ9NS98 782 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HRASLS2Q9NWW9 162 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LYARQ9NX58 379 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TRPC4Q9UBN4 977 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PILRAQ9UKJ1 303 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF451Q9Y4E5 1061 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PRAMEF27A3QJZ7 478 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR5K4A6NMS3 321 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 C2orf74A8MZ97 194 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SLC28A2O43868 658 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 DNAJB5O75953 348 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MFN2O95140 757 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CSNK2A2P19784 350 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 XCR1P46094 333 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LSSP48449 732 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 IL5RAQ01344 420 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KEAP1Q14145 624 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SYPL1Q16563 259 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF773Q6PK81 442 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TMEM64Q6YI46 380 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR4C15Q8NGM1 316 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZCCHC10Q8TBK6 192 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GIPC3Q8TF64 312 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KLHDC7BQ96G42 594 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SLC6A18Q96N87 628 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FEVQ99581 238 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TREX2Q9BQ50 279 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RSPO3Q9BXY4 272 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 POLR1BQ9H9Y6 1135 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 P2RX2Q9UBL9 471 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ENTPD2Q9Y5L3 495 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ENPP4Q9Y6X5 453 aa13.33□□□□□ -0.28
CDK5RAP1-202ENST00000346416 USP34Q70CQ2 3546 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LOC105369274A0A096LPK9 316 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 IGHV1OR15-9A0A0B4J2B8 117 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms