RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ZNF99A8MXY4 864 aaPredicted RBP12.64□□□□□ -0.39
CASC4-202ENST00000345795 ARNTLO00327 626 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 KHNYNO15037 678 aaKnown RBP12.64□□□□□ -0.39
CASC4-202ENST00000345795 MYF6P23409 242 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 TLX1P31314 330 aaPredicted RBP12.64□□□□□ -0.39
CASC4-202ENST00000345795 PIK3CBP42338 1070 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 MAT1AQ00266 395 aaKnown RBP12.64□□□□□ -0.39
CASC4-202ENST00000345795 MTAPQ13126 283 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 CDK5R2Q13319 367 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 KIAA1614Q5VZ46 1190 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 PDZD3Q86UT5 571 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 ANKRD53Q8N9V6 530 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 POC5Q8NA72 575 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 TAMM41Q96BW9 452 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 OR2M4Q96R27 311 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 APOOQ9BUR5 198 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 SIRT5Q9NXA8 310 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 ARHGEF17Q96PE2 2063 aaPredicted RBP12.64□□□□□ -0.39
CASC4-202ENST00000345795 WWP2O00308 870 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 CSRP3P50461 194 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 ACOT4Q8N9L9 421 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 LMX1AQ8TE12 382 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 TSPEARQ8WU66 669 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 RIPOR3Q96MK2 946 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 CLN6Q9NWW5 311 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 ERVK-11Q9UQG0 969 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 CARD8Q9Y2G2 431 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 CLCA3PQ9Y6N3 262 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 TRBV4-1A0A0J9YWV2 114 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 EML2O95834 649 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 ITPKBP27987 946 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 TXNL4AP83876 142 aaKnown RBP12.64□□□□□ -0.39
CASC4-202ENST00000345795 EIF4HQ15056 248 aaKnown RBP12.64□□□□□ -0.39
CASC4-202ENST00000345795 INAQ16352 499 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 TSTQ16762 297 aaKnown RBP12.64□□□□□ -0.39
CASC4-202ENST00000345795 TMEM196Q5HYL7 178 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 GPR149Q86SP6 731 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 SLC9B2Q86UD5 537 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 GALNT12Q8IXK2 581 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 KLHDC8BQ8IXV7 354 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 SVOPLQ8N434 492 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 OR1E3Q8WZA6 343 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 OSBPL10Q9BXB5 764 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 MUC13Q9H3R2 512 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 SLC6A14Q9UN76 642 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 SPACA6W5XKT8 324 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 CDC14CA4D256 554 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 EFCAB9A8MZ26 197 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SGK494L7N484 410 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 UGT2B11O75310 529 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 TSPAN19P0C672 248 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 CSNK2A2P19784 350 aaPredicted RBP12.63□□□□□ -0.39
CASC4-202ENST00000345795 SH3BGRP55822 239 aaPredicted RBP12.63□□□□□ -0.39
CASC4-202ENST00000345795 MVKQ03426 396 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 RUNX1T1Q06455 604 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 GRIK2Q13002 908 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 TEAD4Q15561 434 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SMAD2Q15796 467 aaKnown RBP12.63□□□□□ -0.39
CASC4-202ENST00000345795 OTPQ5XKR4 325 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 ZNF773Q6PK81 442 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SPARTQ8N0X7 666 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SHISA5Q8N114 240 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 COX18Q8N8Q8 333 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 L3MBTL4Q8NA19 623 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 LYSMD1Q96S90 227 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 CD320Q9NPF0 282 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 IL1RAPQ9NPH3 570 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 PRR35P0CG20 571 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 GTF2E2P29084 291 aaKnown RBP12.63□□□□□ -0.39
CASC4-202ENST00000345795 RPL4P36578 427 aaKnown RBP12.63□□□□□ -0.39
CASC4-202ENST00000345795 PPP1CAP62136 330 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 VRK2Q86Y07 508 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SIMC1Q8NDZ2 872 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SLC38A5Q8WUX1 472 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 PIK3R3Q92569 461 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 ZG16BQ96DA0 208 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 LRIG1Q96JA1 1093 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 TGM7Q96PF1 710 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SLC38A3Q99624 504 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 C6orf106Q9H6K1 298 aaPredicted RBP12.63□□□□□ -0.39
CASC4-202ENST00000345795 ZBTB20Q9HC78 741 aaPredicted RBP12.63□□□□□ -0.39
CASC4-202ENST00000345795 TM9SF3Q9HD45 589 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 TMEM184CQ9NVA4 438 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 BOLA2-SMG1P6H3BVE0 249 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 CISD3P0C7P0 127 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 ITGA2P17301 1181 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 DRD3P35462 400 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 KRT20P35900 424 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SOX3P41225 446 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 GSTM5P46439 218 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 LSAMPQ13449 338 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 SPCS2Q15005 226 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 FAM111BQ6SJ93 734 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 TMEM64Q6YI46 380 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 OXR1Q8N573 874 aa12.63□□□□□ -0.39
CASC4-202ENST00000345795 RBM18Q96H35 190 aaKnown RBP12.63□□□□□ -0.39
CASC4-202ENST00000345795 CD207Q9UJ71 328 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms