RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 PRSS58Q8IYP2 241 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDHR4-201ENST00000343366 FER1L6-AS2Q96M78 137 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 PRPF18Q99633 342 aaKnown RBP17.55■□□□□ 0.4
CDHR4-201ENST00000343366 EBPLQ9BY08 206 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 NSRP1Q9H0G5 558 aaKnown RBP17.55■□□□□ 0.4
CDHR4-201ENST00000343366 MIEF1Q9NQG6 463 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 GIMAP4Q9NUV9 329 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 CACNA1DQ01668 2161 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 IGKV3D-11A0A0A0MRZ8 115 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 FAM227AF5H4B4 570 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 DYRK3O43781 588 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 JRKO75564 520 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 CDC123O75794 336 aaPredicted RBP17.54■□□□□ 0.4
CDHR4-201ENST00000343366 GPR75O95800 540 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 ICAM2P13598 275 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 SDC1P18827 310 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 PRPS1L1P21108 318 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 EPHA3P29320 983 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 GALNSP34059 522 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 AQP5P55064 265 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 RPS18P62269 152 aaKnown RBP17.54■□□□□ 0.4
CDHR4-201ENST00000343366 IGLV3-21P80748 117 aaPredicted RBP17.54■□□□□ 0.4
CDHR4-201ENST00000343366 ACTN3Q08043 901 aaPredicted RBP17.54■□□□□ 0.4
CDHR4-201ENST00000343366 C2orf80Q0P641 193 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 ERV3-1Q14264 604 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 TERF2Q15554 542 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 GSTA3Q16772 222 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 C18orf63Q68DL7 685 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 NXNQ6DKJ4 435 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 HIST2H2BCQ6DN03 193 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 FAM71E1Q6IPT2 247 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 SLC48A1Q6P1K1 146 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 OR4K14Q8NGD5 310 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 C9orf43Q8TAL5 461 aaPredicted RBP17.54■□□□□ 0.4
CDHR4-201ENST00000343366 DNAJB14Q8TBM8 379 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 ADAMTS17Q8TE56 1095 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 PPP1R36Q96LQ0 422 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 ZNF317Q96PQ6 595 aaPredicted RBP17.54■□□□□ 0.4
CDHR4-201ENST00000343366 CSF3RQ99062 836 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 TCF7L2Q9NQB0 619 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 TEX10Q9NXF1 929 aaPredicted RBP17.54■□□□□ 0.4
CDHR4-201ENST00000343366 TAS2R7Q9NYW3 318 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 POLHQ9Y253 713 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 MRPS18BQ9Y676 258 aaKnown RBP17.54■□□□□ 0.4
CDHR4-201ENST00000343366 ZNF780BQ9Y6R6 833 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 ABCA12Q86UK0 2595 aa17.54■□□□□ 0.4
CDHR4-201ENST00000343366 TCRBV16S1A1N1A0A5B0 115 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 TBX19O60806 448 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 IL3P08700 152 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 COX7A2P14406 83 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 IDO1P14902 403 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 OTX2P32243 289 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 HPCAL1P37235 193 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 C21orf58P58505 322 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 PLIN5Q00G26 463 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 CDC20Q12834 499 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 FAM219BQ5XKK7 198 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 SHISA6Q6ZSJ9 500 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 CPEB2Q7Z5Q1 589 aaKnown RBP17.53■□□□□ 0.4
CDHR4-201ENST00000343366 LIX1Q8N485 282 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 TMEM102Q8N9M5 508 aaPredicted RBP17.53■□□□□ 0.4
CDHR4-201ENST00000343366 RBM18Q96H35 190 aaKnown RBP17.53■□□□□ 0.4
CDHR4-201ENST00000343366 TUBB6Q9BUF5 446 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 RBCK1Q9BYM8 510 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 ATAD3AQ9NVI7 634 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 FGFR1OP2Q9NVK5 253 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 TRIM33Q9UPN9 1127 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 HS3ST3B1Q9Y662 390 aa17.53■□□□□ 0.4
CDHR4-201ENST00000343366 UBDO15205 165 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 NKX2-8O15522 239 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 KLHL41O60662 606 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 LSP1P33241 339 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 ALDH9A1P49189 494 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 IDH3AP50213 366 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 CLNS1AP54105 237 aaKnown RBP17.52■□□□□ 0.4
CDHR4-201ENST00000343366 BTG2P78543 158 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 IL10RAQ13651 578 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 DPY19L1Q2PZI1 675 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 SLC9B1Q4ZJI4 515 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 METTL21CQ5VZV1 264 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 NDUFAF7Q7L592 441 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 ANKRD37Q7Z713 158 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 MRGPREQ86SM8 312 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 ST13P4Q8IZP2 240 aaPredicted RBP17.52■□□□□ 0.4
CDHR4-201ENST00000343366 DAZLQ92904 295 aaKnown RBP17.52■□□□□ 0.4
CDHR4-201ENST00000343366 LPAR4Q99677 370 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 ALOXE3Q9BYJ1 711 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 ZNF700Q9H0M5 742 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 REEP4Q9H6H4 257 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 WDR55Q9H6Y2 383 aaPredicted RBP17.52■□□□□ 0.4
CDHR4-201ENST00000343366 NPHS2Q9NP85 383 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 ADAP2Q9NPF8 381 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 ZNF71Q9NQZ8 489 aaPredicted RBP17.52■□□□□ 0.4
CDHR4-201ENST00000343366 KLHL14Q9P2G3 628 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 CES1P1Q9UKY3 287 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 ENTPD4Q9Y227 616 aa17.52■□□□□ 0.4
CDHR4-201ENST00000343366 SCN2AQ99250 2005 aa17.52■□□□□ 0.39
CDHR4-201ENST00000343366 GOLGA8QA0A0J9YX86 632 aa17.51■□□□□ 0.39
CDHR4-201ENST00000343366 CDC14CA4D256 554 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms