RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SLC7A13Q8TCU3 470 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 C16orf78Q8WTQ4 265 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ASB8Q9H765 288 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 TDRD3Q9H7E2 651 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 DNAJC27Q9NZQ0 273 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PIAS1O75925 651 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 TGFB1P01137 390 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 EPOP01588 193 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 HBE1P02100 147 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 MGST1P10620 155 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 CAV2P51636 162 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 GSTM4Q03013 218 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 GRM3Q14832 879 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 NDNFQ8TB73 568 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 MAL2Q969L2 176 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PYCR2Q96C36 320 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CNN2Q99439 309 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 ELOVL4Q9GZR5 314 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 SLC25A31Q9H0C2 315 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 NDOR1Q9UHB4 597 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 WIF1Q9Y5W5 379 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 MBD5Q9P267 1494 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 A0A1W2PP18 115 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PPP5D1E7EU14 171 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 K7ERQ8 282 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 SLC1A7O00341 560 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 KLF11O14901 512 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 TXNDC12O95881 172 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 DHRS4L1P0CG22 281 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 SMIM6P0DI80 62 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 HBG1P69891 147 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 HBG2P69892 147 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ZNF543Q08ER8 600 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PCGF3Q3KNV8 242 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 C9orf64Q5T6V5 341 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 GLT8D1Q68CQ7 371 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 NANPQ8TBE9 248 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ADAMTS19Q8TE59 1207 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 WDR55Q9H6Y2 383 aaPredicted RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 LIN7BQ9HAP6 207 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ACP6Q9NPH0 428 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 AAASQ9NRG9 546 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 DHDHQ9UQ10 334 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PCDHGA2Q9Y5H1 932 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 KIF26AQ9ULI4 1882 aaPredicted RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 H3BUI4 141 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 FPR1P21462 350 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ETV6P41212 452 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ENPP2Q13822 863 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CBX2Q14781 532 aaPredicted RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 CCNJQ5T5M9 372 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 EFCAB12Q6NXP0 572 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 MRPL10Q7Z7H8 261 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 IGFN1Q86VF2 1251 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 SERPINA12Q8IW75 414 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 OR10Z1Q8NGY1 313 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 NPLOC4Q8TAT6 608 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 DAZAP1Q96EP5 407 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 MICU1Q9BPX6 476 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ZDHHC6Q9H6R6 413 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 MAGIXQ9H6Y5 334 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 TCAF1Q9Y4C2 921 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PCDHB1Q9Y5F3 818 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 B3GALT1Q9Y5Z6 326 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 SALL1Q9NSC2 1324 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 hCG_1807616A0A1W2PRN6 198 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ANKRD34BA5PLL1 514 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 TLX2O43763 284 aaPredicted RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 ENSAO43768 121 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 GSRP00390 522 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ELK1P19419 428 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ITPKBP27987 946 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 DLX5P56178 289 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 GAD2Q05329 585 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ATPAF1Q5TC12 328 aaPredicted RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 HECTD2Q5U5R9 776 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 MPZL3Q6UWV2 235 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CERS6Q6ZMG9 384 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 BBS12Q6ZW61 710 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 LDHDQ86WU2 507 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 RNF141Q8WVD5 230 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 FBRSL1Q9HCM7 1045 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 MGAMO43451 1857 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 D6RAR5 112 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CHRM5P08912 532 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 SPP1P10451 314 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 PTAFRP25105 342 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 HOXA9P31269 272 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 FMO1Q01740 532 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 C3orf38Q5JPI3 329 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 TREML1Q86YW5 311 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SIAH1Q8IUQ4 282 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 OR2T33Q8NG76 320 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 GLYATL1Q969I3 302 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 APOLD1Q96LR9 279 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 TARS2Q9BW92 718 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 LHPPQ9H008 270 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CDC14AQ9UNH5 594 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 MED16Q9Y2X0 877 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 DEDDO75618 318 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms