RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 C22orf42Q6IC83 251 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PLEKHG7Q6ZR37 379 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 DCDC5Q6ZRR9 648 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NRSN1Q8IZ57 195 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 FAM86B1Q8N7N1 296 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 LMNTD1Q8N9Z9 388 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 FBXO15Q8NCQ5 510 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 TNFAIP8L1Q8WVP5 186 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SLC38A3Q99624 504 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PDCD10Q9BUL8 212 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 CWH43Q9H720 699 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NLGN3Q9NZ94 848 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ASB1Q9Y576 335 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ARID1BQ8NFD5 2236 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 NUP205Q92621 2012 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ELOA3DA6NLF2 546 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 RNASET2O00584 256 aaKnown RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 ENTPD6O75354 484 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 CD2P06729 351 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 YES1P07947 543 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PIM1P11309 404 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 CR2P20023 1033 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 AHCYP23526 432 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PCGF2P35227 344 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 GMFBP60983 142 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 DEFB103AP81534 67 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ELOA3BQ3SY89 546 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 FOXB2Q5VYV0 432 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 Q6ZPB1 254 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 ZNF676Q8N7Q3 588 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NUP43Q8NFH3 380 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ELOA3Q8NG57 546 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 OR13F1Q8NGS4 319 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SUN3Q8TAQ9 357 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NEIL3Q8TAT5 605 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.86□□□□□ -1.31
VCAN-202ENST00000342785 TSEN15Q8WW01 171 aaKnown RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 ZSWIM3Q96MP5 696 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 CLCA3PQ9Y6N3 262 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 TUBGCP6Q96RT7 1819 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SH3D21A4FU49 640 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 LATO43561 262 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 OSMP13725 252 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 F8A1P23610 371 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SLC9A3P48764 834 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 AP3S2P59780 193 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 GRSF1Q12849 480 aaKnown RBP eCLIP6.86□□□□□ -1.31
VCAN-202ENST00000342785 ALG11Q2TAA5 492 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ITPRIPL2Q3MIP1 535 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SLC39A5Q6ZMH5 540 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ABHD13Q7L211 337 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 TRIM46Q7Z4K8 759 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NRROSQ86YC3 692 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NDNFQ8TB73 568 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 CCDC115Q96NT0 180 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 BRF2Q9HAW0 419 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SLC35C2Q9NQQ7 365 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ERVK13-1Q9NX77 482 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 MARK1Q9P0L2 795 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SARDHQ9UL12 918 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 CDH7Q9ULB5 785 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 C2orf92A0A1B0GVN3 265 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ANXA2P2A6NMY6 339 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 OXSR1O95747 527 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 SERPINA3P01011 423 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ANXA2P07355 339 aaKnown RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 TIMP2P16035 220 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 GGT2P36268 569 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 BLKP51451 505 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SPCS2Q15005 226 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NDUFAF5Q5TEU4 345 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PAMR1Q6UXH9 720 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 GAREM2Q75VX8 874 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 FAM217AQ8IXS0 508 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 KLHDC8AQ8IYD2 350 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 TOMM5Q8N4H5 51 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ZFP41Q8N8Y5 198 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 WFDC5Q8TCV5 224 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 DOK4Q8TEW6 326 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SMARCD2Q92925 531 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 OR2M4Q96R27 311 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SORBS1Q9BX66 1292 aaKnown RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 ELL3Q9HB65 397 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 SMURF1Q9HCE7 757 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 GPN1Q9HCN4 374 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 Q9N2J8 555 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 CKLFQ9UBR5 152 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 A0A1B0GTL3 188 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 SOBPA7XYQ1 873 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 HEPACAM2A8MVW5 462 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 INMT-MINDY4F8WBC2 141 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 CPNE3O75131 537 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 ZNF3P17036 446 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 HMGA1P17096 107 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 CD40LGP29965 261 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 APOFQ13790 326 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ZNF181Q2M3W8 571 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 C6orf183Q5T699 404 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 PARS2Q7L3T8 475 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 GALNT12Q8IXK2 581 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms