RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 DNAJB8Q8NHS0 232 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 ZNF563Q8TA94 476 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 CHPT1Q8WUD6 406 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 ITPKCQ96DU7 683 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 GPR78Q96P69 363 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 UHRF1Q96T88 793 aaPredicted RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 REEP4Q9H6H4 257 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 NFKBIL1Q9UBC1 381 aaPredicted RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 NUFIP1Q9UHK0 495 aaKnown RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 HCN4Q9Y3Q4 1203 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 PCDHGB6Q9Y5F9 930 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 DLEC1Q9Y238 1755 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 ZSCAN5BA6NJL1 495 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 E2F3O00716 465 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 CTDSP2O14595 271 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 ABLIM3O94929 683 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 BMP4P12644 408 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 MTHFD2P13995 350 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 SDC1P18827 310 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 HOXC13P31276 330 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 RPL34P49207 117 aaKnown RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 RPL6Q02878 288 aaKnown RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 BTBD16Q32M84 506 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 ZNF613Q6PF04 617 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 ARL9Q6T311 187 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 OR13F1Q8NGS4 319 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 GEMIN6Q8WXD5 167 aaKnown RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 TOX2Q96NM4 488 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 IL20RAQ9UHF4 553 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 AQP9O43315 295 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 TOXO94900 526 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 B3GALT4O96024 378 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 H1F0P07305 194 aaKnown RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 TIA1P31483 386 aaKnown RBP eCLIP12.91□□□□□ -0.344e-7■■■■□ 20.4
TMEM248-201ENST00000341567 SPATS1Q496A3 300 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 COQ5Q5HYK3 327 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 KHDRBS2Q5VWX1 349 aaKnown RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 TANGO2Q6ICL3 276 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 WDR53Q7Z5U6 358 aaPredicted RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 ELMOD2Q8IZ81 293 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 OR9Q2Q8NGE9 314 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 CRELD1Q96HD1 420 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 GPR174Q9BXC1 333 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 MMP28Q9H239 520 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 TTYH1Q9H313 450 aaPredicted RBP12.91□□□□□ -0.34
TMEM248-201ENST00000341567 TUBB1Q9H4B7 451 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 CD300AQ9UGN4 299 aa12.91□□□□□ -0.34
TMEM248-201ENST00000341567 FAM92AA1XBS5 289 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 CPED1A4D0V7 1026 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 RHPN2P1A8MT19 583 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 HCN1O60741 890 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 HNRNPA1P09651 372 aaKnown RBP eCLIP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 C1SP09871 688 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 LARS2Q15031 903 aaKnown RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 FAM78AQ5JUQ0 283 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 SLC35F1Q5T1Q4 408 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 AMIGO1Q86WK6 493 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 ZSWIM9Q86XI8 627 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 NAGSQ8N159 534 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 CWH43Q9H720 699 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 FAM120CQ9NX05 1096 aaKnown RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 RNGTTO60942 597 aaKnown RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 CAPNS1P04632 268 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 IL1RNP18510 177 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 CA5AP35218 305 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 CCR2P41597 374 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 CRISP3P54108 245 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 SHQ1Q6PI26 577 aaKnown RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 LHFPL3Q86UP9 236 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 TSPYL5Q86VY4 417 aaPredicted RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 UCK2Q9BZX2 261 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 ABCG4Q9H172 646 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 POLMQ9NP87 494 aaPredicted RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 B3GALT2O43825 422 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 SDC3O75056 442 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 IDUAP35475 653 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 CLDN8P56748 225 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 SIM1P81133 766 aaPredicted RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 ZNF267Q14586 743 aaPredicted RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 RUNDC3AQ59EK9 446 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 CD300LGQ6UXG3 332 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 TRMT2BQ96GJ1 504 aaKnown RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 GSDMCQ9BYG8 508 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 SIAEQ9HAT2 523 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 PPIEQ9UNP9 301 aaKnown RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 ABCG2Q9UNQ0 655 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 RIF1Q5UIP0 2472 aaKnown RBP12.9□□□□□ -0.34
TMEM248-201ENST00000341567 ARFGEF1Q9Y6D6 1849 aa12.9□□□□□ -0.34
TMEM248-201ENST00000341567 TCRBV21S2A2A0A5A6 115 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SLC7A9P82251 487 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 HNRNPA1L2Q32P51 320 aaKnown RBP12.89□□□□□ -0.35
TMEM248-201ENST00000341567 USP53Q70EK8 1073 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 TRIM43Q96BQ3 446 aaPredicted RBP12.89□□□□□ -0.35
TMEM248-201ENST00000341567 ZNF486Q96H40 463 aaPredicted RBP12.89□□□□□ -0.35
TMEM248-201ENST00000341567 PCBD2Q9H0N5 130 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 TM7SF3Q9NS93 570 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 GNG2P59768 71 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SPHARQ15513 63 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 ZNF480Q8WV37 535 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms