RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 HAT1O14929 419 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 INHBBP09529 407 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 NR2F1P10589 423 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 ANXA8P13928 327 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 ITGA2P17301 1181 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 XCR1P46094 333 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 CCR3P51677 355 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 REEP5Q00765 189 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 LASP1Q14847 261 aaKnown RBP9.81□□□□□ -0.84
LIMA1-201ENST00000341247 PTGES3Q15185 160 aaKnown RBP9.81□□□□□ -0.84
LIMA1-201ENST00000341247 C18orf63Q68DL7 685 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 OR4C11Q6IEV9 310 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 ARMC8Q8IUR7 673 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 OR4D11Q8NGI4 311 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 OR5P2Q8WZ92 322 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 NKX2-4Q9H2Z4 354 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 OR51I1Q9H343 314 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 ZBTB20Q9HC78 741 aaPredicted RBP9.81□□□□□ -0.84
LIMA1-201ENST00000341247 SIRT3Q9NTG7 399 aaPredicted RBP9.81□□□□□ -0.84
LIMA1-201ENST00000341247 POM121BA6NF01 834 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 SEMA7AO75326 666 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 CEACAM5P06731 702 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 HNRNPCP07910 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
LIMA1-201ENST00000341247 PCBP3P57721 371 aaKnown RBP9.81□□□□□ -0.84
LIMA1-201ENST00000341247 SEC23BQ15437 767 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 MAPK11Q15759 364 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 CRB2Q5IJ48 1285 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 PRSS48Q7RTY5 328 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 IGFN1Q86VF2 1251 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 SVOPQ8N4V2 548 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 CCL4L1Q8NHW4 92 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 MTERF3Q96E29 417 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 PITX2Q99697 317 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 TEX101Q9BY14 249 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 GABARAPL3Q9BY60 117 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 SLC17A9Q9BYT1 436 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 RSPH9Q9H1X1 276 aaPredicted RBP9.81□□□□□ -0.84
LIMA1-201ENST00000341247 GLIPR2Q9H4G4 154 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 EPS8L2Q9H6S3 715 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 FGF22Q9HCT0 170 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 SEMA3GQ9NS98 782 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 POFUT2Q9Y2G5 429 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 HCN4Q9Y3Q4 1203 aa9.81□□□□□ -0.84
LIMA1-201ENST00000341247 FRS3O43559 492 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 EML2O95834 649 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 CERS1P27544 350 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 CNR2P34972 360 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 IGFALSP35858 605 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 RAB28P51157 221 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 PPP2CBP62714 309 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 PPP2CAP67775 309 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 PRDX1Q06830 199 aaKnown RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 ST3GAL4Q11206 333 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 SLAMF1Q13291 335 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 LRRC32Q14392 662 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 IKBIPQ70UQ0 350 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 COMTD1Q86VU5 262 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 CROCCP3Q8IVE0 287 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 FRMD1Q8N878 549 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 TP53I13Q8NBR0 393 aaPredicted RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 ZBED6CLQ96FA7 236 aaPredicted RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 RHBGQ9H310 441 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 PELI2Q9HAT8 420 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 ATG4BQ9Y4P1 393 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 HSPE1-MOB4S4R3N1 261 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 PRAMEF27A3QJZ7 478 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 RNGTTO60942 597 aaKnown RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 GABARAPO95166 117 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 DBTP11182 482 aaKnown RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 TNNI3P19429 210 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 SNRPNP63162 240 aaKnown RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 TFF2Q03403 129 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 DUSP2Q05923 314 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 TIGD6Q17RP2 521 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 C10orf62Q5T681 223 aaPredicted RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 SYCE2Q6PIF2 218 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 PTCHD4Q6ZW05 846 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 TRIM73Q86UV7 250 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 RAB42Q8N4Z0 105 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 COL26A1Q96A83 441 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 YIPF6Q96EC8 236 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 NEURL3Q96EH8 262 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 PDXPQ96GD0 296 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 C16orf58Q96GQ5 468 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 WASH6PQ9NQA3 447 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 LRIT2A6NDA9 550 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 TRIM64BA6NI03 449 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 EFCAB9A8MZ26 197 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 NTN1O95631 604 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 PTHP01270 115 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 C5AR1P21730 350 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 CHMP24386 653 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 GADD45AP24522 165 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 BUD31P41223 144 aaPredicted RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 RNF144AP50876 292 aaPredicted RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 CXCR4P61073 352 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 ERVK-21P61565 698 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 ITPRIPL2Q3MIP1 535 aa9.8□□□□□ -0.84
LIMA1-201ENST00000341247 SYT6Q5T7P8 510 aaPredicted RBP9.8□□□□□ -0.84
LIMA1-201ENST00000341247 SAXO2Q658L1 398 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms