RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 C16orf47Q6ZP98 133 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-202ENST00000340993 CRLF3Q8IUI8 442 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 WDR75Q8IWA0 830 aaKnown RBP12.35□□□□□ -0.43
TUBD1-202ENST00000340993 NCLNQ969V3 563 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 FAIM2Q9BWQ8 316 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 CLK4Q9HAZ1 481 aaKnown RBP12.35□□□□□ -0.43
TUBD1-202ENST00000340993 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 CLCA3PQ9Y6N3 262 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 TRBV11-1A0A0K0K1C0 115 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 SERTM1A2A2V5 107 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 SAGE2PA6NJ88 616 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 C9JVG2 144 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 MAN1A2O60476 641 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 NME6O75414 186 aaPredicted RBP12.34□□□□□ -0.43
TUBD1-202ENST00000340993 ITGB2P05107 769 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 BCKDHAP12694 445 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 NT5EP21589 574 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 XKP51811 444 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 GYS2P54840 703 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 SLC26A5P58743 744 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 KIAA0040Q15053 153 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 SLC9B1Q4ZJI4 515 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 C6orf136Q5SQH8 315 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 IRAK1BP1Q5VVH5 260 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 IL23RQ5VWK5 629 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 MAVSQ7Z434 540 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 TICAM1Q8IUC6 712 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 KBTBD2Q8IY47 623 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 OR4K14Q8NGD5 310 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 CKAP2Q8WWK9 683 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 TANKQ92844 425 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 PPP3R2Q96LZ3 170 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 TUBB6Q9BUF5 446 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 ANKRA2Q9H9E1 313 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 KCNK13Q9HB14 408 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 MIEF1Q9NQG6 463 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 ANKRD10Q9NXR5 420 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 PLA2G3Q9NZ20 509 aa12.34□□□□□ -0.43
TUBD1-202ENST00000340993 MKRN2OSH3BPM6 223 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 ERVH48-1M5A8F1 160 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 DIAPH2O60879 1101 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 GPR75O95800 540 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 ALOX15P16050 662 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 ARFIP1P53367 373 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 ERVK-8P63133 956 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF33BQ06732 778 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF267Q14586 743 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 SLC48A1Q6P1K1 146 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 CCDC116Q8IYX3 515 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 KRTCAP2Q8N6L1 136 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 PTPMT1Q8WUK0 201 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 CIDECQ96AQ7 238 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 C11orf24Q96F05 449 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 RBM18Q96H35 190 aaKnown RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 VPS50Q96JG6 964 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 IMMP1LQ96LU5 166 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 FAM117AQ9C073 453 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 BRINP2Q9C0B6 783 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 ADAP2Q9NPF8 381 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 MED4Q9NPJ6 270 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 ERVK-19Q9WJR5 959 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 C1orf226A1L170 272 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 SDHDO14521 159 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 GUCY1B2O75343 617 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 CT62P0C5K7 136 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 G6PDP11413 515 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 COX7A2P14406 83 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 DIO3P55073 304 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 MRPS35P82673 323 aaKnown RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 PLIN5Q00G26 463 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 TMEM198Q66K66 360 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 APLFQ8IW19 511 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 SIMC1Q8NDZ2 872 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 C9orf43Q8TAL5 461 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 SLC2A12Q8TD20 617 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 KAT2AQ92830 837 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 CNRIP1Q96F85 164 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 MAGED4Q96JG8 741 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 MAGEB18Q96M61 343 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 LHPPQ9H008 270 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 SH3BP4Q9P0V3 963 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 VTI1BQ9UEU0 232 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-202ENST00000340993 CSAG2Q9Y5P2 127 aa12.33□□□□□ -0.44
TUBD1-202ENST00000340993 HDAC3O15379 428 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 SERPINA7P05543 415 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 CPMP14384 443 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 SSTR4P31391 388 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 STT3AP46977 705 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 CD97P48960 835 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 NFATC3Q12968 1075 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 SERTAD2Q14140 314 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 HEPACAMQ14CZ8 416 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 ELAVL1Q15717 326 aaKnown RBP12.32□□□□□ -0.44
TUBD1-202ENST00000340993 FAM71E1Q6IPT2 247 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 GALNT18Q6P9A2 607 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 FAM111BQ6SJ93 734 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 OR9A2Q8NGT5 310 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms