RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 OR9A2Q8NGT5 310 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 NEURL3Q96EH8 262 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 ZBED6CLQ96FA7 236 aaPredicted RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 TMEM19Q96HH6 336 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 GUCD1Q96NT3 240 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 BBS4Q96RK4 519 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 PITHD1Q9GZP4 211 aaPredicted RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 TMEM38AQ9H6F2 299 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 IL21RQ9HBE5 538 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 GPR27Q9NS67 375 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 RPS6KA6Q9UK32 745 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 NCOR1O75376 2440 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 LDB3O75112 727 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 HMGN2P05204 90 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TFPTP0C1Z6 253 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ARAFP10398 606 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 POU2F1P14859 743 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ST6GAL1P15907 406 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 BCKDHBP21953 392 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 PPIBP23284 216 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 NDUFS1P28331 727 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 SOX18P35713 384 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RPL3P39023 403 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 PEX19P40855 299 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LRRC74AQ0VAA2 488 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 FADDQ13158 208 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LASP1Q14847 261 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TMEM35AQ53FP2 167 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LAIR1Q6GTX8 287 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TSSK4Q6SA08 328 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LPCAT2Q7L5N7 544 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ASPGQ86U10 573 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TMEM52Q8NDY8 209 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TTLQ8NG68 377 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 GPR32P1Q8NGA4 272 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 OR4D11Q8NGI4 311 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ZDHHC1Q8WTX9 485 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 QRFPRQ96P65 431 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 PRR14Q9BWN1 585 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 OR51I1Q9H343 314 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CLK4Q9HAZ1 481 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ZCCHC3Q9NUD5 404 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 UCKL1Q9NWZ5 548 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 THUMPD1Q9NXG2 353 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TAS2R7Q9NYW3 318 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 KCMF1Q9P0J7 381 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ANKMY1Q9P2S6 941 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TRPC4Q9UBN4 977 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ADAM29Q9UKF5 820 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RP1P56715 2156 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LOC100130705A0A1B0GUX0 176 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CHURC1-FNTBB4DL54 471 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 FFAR1O14842 300 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 PCDH17O14917 1159 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 VILLO15195 856 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 KRT75O95678 551 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ZNF16P17020 682 aaPredicted RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 MC3RP41968 323 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RPL5P46777 297 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LIM2P55344 173 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LSM11P83369 360 aaKnown RBP eCLIP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RPL6Q02878 288 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RAPSNQ13702 412 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 MAP7Q14244 749 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 KIR2DS3Q14952 304 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 C6orf132Q5T0Z8 1188 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 SHQ1Q6PI26 577 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RBM44Q6ZP01 1051 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TSPYL5Q86VY4 417 aaPredicted RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 PARGQ86W56 976 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LACC1Q8IV20 430 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CNIH3Q8TBE1 160 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 SDCCAG3Q96C92 435 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 NMD3Q96D46 503 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TM4SF19Q96DZ7 209 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 HSPA12BQ96MM6 686 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ZNF681Q96N22 645 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RBM4BQ9BQ04 359 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RHNO1Q9BSD3 238 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RBM4Q9BWF3 364 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 GSDMCQ9BYG8 508 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TM9SF3Q9HD45 589 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ADPRHL2Q9NX46 363 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CORO2BQ9UQ03 480 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 BDP1A6H8Y1 2624 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 METTL12A8MUP2 240 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 AGRPO00253 132 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TNFSF14O43557 240 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 MED26O95402 600 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 PABPC4LP0CB38 370 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 FOSL2P15408 326 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CD38P28907 300 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 SERPINB1P30740 379 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CDH12P55289 794 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 VSX2P58304 361 aaPredicted RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RPS15AP62244 130 aaKnown RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 FUT5Q11128 374 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 MYBPC3Q14896 1274 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TEAD4Q15561 434 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms