RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 MARCH5Q9NX47 278 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 ZFR2Q9UPR6 939 aaKnown RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 PARP14Q460N5 1801 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 TEX46H3BTG2 121 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 H7C0S8 307 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 PRMT3O60678 531 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 CXCR2P25025 360 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 GZMMP51124 257 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 CTBP2P56545 445 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 SSX1Q16384 188 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 FAHD1Q6P587 224 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 ARL9Q6T311 187 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 VN1R5Q7Z5H4 357 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 LACC1Q8IV20 430 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 SYNPOQ8N3V7 929 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 C16orf78Q8WTQ4 265 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 REPS1Q96D71 796 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 ANKHQ9HCJ1 492 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 MAPRE3Q9UPY8 281 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 KIAA0100Q14667 2235 aaKnown RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 A0A0C4DFX4 3053 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 GNB5O14775 395 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 HYAL3O43820 417 aaPredicted RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 NTN1O95631 604 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 POLR2EP19388 210 aaKnown RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 MAPK8P45983 427 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 KCNC4Q03721 635 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 LARS2Q15031 903 aaKnown RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 CDK10Q15131 360 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 SLC30A6Q6NXT4 461 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 GDPD4Q6W3E5 623 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 RFPL4BQ6ZWI9 263 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 LUZP2Q86TE4 346 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 GALNT13Q8IUC8 556 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 HORMAD2Q8N7B1 307 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 OR4F15Q8NGB8 312 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 OR51G2Q8NGK0 314 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 UFD1Q92890 307 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 TRMT61AQ96FX7 289 aaKnown RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 OR2A14Q96R47 310 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 ZNF607Q96SK3 696 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 MED28Q9H204 178 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 STUB1Q9UNE7 303 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 MKI67P46013 3256 aaKnown RBP13.46□□□□□ -0.25
PCDH8-201ENST00000338862 LOC105369274A0A096LPK9 316 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 H3BQ06 376 aaPredicted RBP13.46□□□□□ -0.25
PCDH8-201ENST00000338862 PTPN6P29350 595 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 SSTR2P30874 369 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 PCGF2P35227 344 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 TLE2Q04725 743 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 SLC3A1Q07837 685 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 GRIN2CQ14957 1233 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 SPIN4Q56A73 249 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 LIPJQ5W064 366 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 OR4N4Q8N0Y3 316 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 LRRC17Q8N6Y2 441 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 NEIL3Q8TAT5 605 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 OPALINQ96PE5 141 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 TEX12Q9BXU0 123 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 TBC1D24Q9ULP9 559 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 F5P12259 2224 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
PCDH8-201ENST00000338862 INMT-MINDY4F8WBC2 141 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 EPHX1P07099 455 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
PCDH8-201ENST00000338862 NOS3P29474 1203 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 WASP42768 502 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 DCDC1P59894 354 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 ABATP80404 500 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 BCL2L15Q5TBC7 163 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 C6orf120Q7Z4R8 191 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 OR10H4Q8NGA5 316 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 OR4K5Q8NGD3 323 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 PPIL3Q9H2H8 161 aaKnown RBP13.46□□□□□ -0.25
PCDH8-201ENST00000338862 SATB2Q9UPW6 733 aa13.46□□□□□ -0.25
PCDH8-201ENST00000338862 CACNA1IQ9P0X4 2223 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 CD9P21926 228 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 UGT2B10P36537 528 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 CDC20Q12834 499 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 FXNQ16595 210 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 MPPE1Q53F39 396 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 KLBQ86Z14 1044 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 NPAS4Q8IUM7 802 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 OR52N2Q8NGI0 321 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 TEFMQ96QE5 360 aaKnown RBP13.46□□□□□ -0.26
PCDH8-201ENST00000338862 XKR8Q9H6D3 395 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.26
PCDH8-201ENST00000338862 NAALAD2Q9Y3Q0 740 aa13.46□□□□□ -0.26
PCDH8-201ENST00000338862 RB1P06400 928 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 CBSLP0DN79 551 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 CYP2A6P11509 494 aaPredicted RBP13.45□□□□□ -0.26
PCDH8-201ENST00000338862 CBSP35520 551 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 P2RY14Q15391 338 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 RD3Q7Z3Z2 195 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF480Q8WV37 535 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 RAD51AP1Q96B01 352 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 OR4K3Q96R72 315 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 C17orf62Q9BQA9 187 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 BARHL1Q9BZE3 327 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms