RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MROH9Q5TGP6 573 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 DND1Q8IYX4 353 aaKnown RBP9.86□□□□□ -0.83
CAPN3-202ENST00000337571 SLC15A4Q8N697 577 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 OR5M9Q8NGP3 310 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 RHEBL1Q8TAI7 183 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 NUBPLQ8TB37 319 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 FBXO25Q8TCJ0 367 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF721Q8TF20 911 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 RIT1Q92963 219 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ATP6V1E2Q96A05 226 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 SARAFQ96BY9 339 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 SMC6Q96SB8 1091 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ATOH8Q96SQ7 321 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 MTERF1Q99551 399 aaKnown RBP9.86□□□□□ -0.83
CAPN3-202ENST00000337571 SORBS1Q9BX66 1292 aaKnown RBP9.86□□□□□ -0.83
CAPN3-202ENST00000337571 IPPKQ9H8X2 491 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ZDHHC11Q9H8X9 412 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 MCCC2Q9HCC0 563 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 IGSF5Q9NSI5 407 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 PNPLA3Q9NST1 481 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ALKBH4Q9NXW9 302 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 HRH3Q9Y5N1 445 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.86□□□□□ -0.83
CAPN3-202ENST00000337571 CELSR1Q9NYQ6 3014 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 NKX2-6A6NCS4 301 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 CAPN14A8MX76 684 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 FAM47E-STBD1D6RA91 191 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 PROM1O43490 865 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 FGF17O60258 216 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 SUSD5O60279 629 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 UGDHO60701 494 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 GLSO94925 669 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 GPR75O95800 540 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 C2P06681 752 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 ALOX15P16050 662 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 SERPINB3P29508 390 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 TYK2P29597 1187 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 GMPRP36959 345 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 MAGEA5P43359 124 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 DNASE1L1P49184 302 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 RPS13P62277 151 aaKnown RBP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 TNFRSF17Q02223 184 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 FOLH1Q04609 750 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 PCDH1Q08174 1060 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 DLG1Q12959 904 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 GTF2H2Q13888 395 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 SETDB1Q15047 1291 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 CPSF6Q16630 551 aaKnown RBP eCLIP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 WLSQ5T9L3 541 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 C18orf63Q68DL7 685 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 GTF2H2CQ6P1K8 395 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 B3GNT6Q6ZMB0 384 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 RNF111Q6ZNA4 994 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 TRILQ7L0X0 811 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 ST13P4Q8IZP2 240 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 CLYBLQ8N0X4 340 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 ZCCHC7Q8N3Z6 543 aaKnown RBP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 MARVELD2Q8N4S9 558 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 TMEM251Q8N6I4 163 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 FAM13CQ8NE31 585 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 UBTD2Q8WUN7 234 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 KCTD4Q8WVF5 259 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 FBXL20Q96IG2 436 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 CNPPD1Q9BV87 410 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 UCK2Q9BZX2 261 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 DMRT3Q9NQL9 472 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 LYARQ9NX58 379 aaKnown RBP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 TUBA8Q9NY65 449 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 CNIH4Q9P003 139 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 BOKQ9UMX3 212 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-202ENST00000337571 TSC22D4Q9Y3Q8 395 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 ATG4BQ9Y4P1 393 aa9.85□□□□□ -0.83
CAPN3-202ENST00000337571 PHF3Q92576 2039 aaKnown RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 A0A096LPK6 155 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 TRGV5A0A0B4J1U4 118 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 A0A0G2JMM0 328 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 A0A1B0GVC2 190 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 A0A1W2PPB8 328 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 A0A1W2PRS3 328 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 OR6C76A6NM76 312 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 KIR3DP1A8MWS1 328 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 H0YIV9 168 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 PLPP1O14494 284 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 AQP7O14520 342 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 WDR1O75083 606 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 KLHL2O95198 593 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 CLDN9O95484 217 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 IGHG3P01860 377 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 C1QAP02745 245 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 HOXD4P09016 255 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 FAM58BPP0C7Q3 252 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 CCL3P10147 92 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 POU3F2P20265 443 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 PIGAP37287 484 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 ZFP36L2P47974 494 aaKnown RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 NUP107P57740 925 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 ETF1P62495 437 aaKnown RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 HERVK_113P63132 956 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 ERVK-8P63133 956 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 IGLV3-21P80748 117 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms