RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CPEB1Q9BZB8 566 aaKnown RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 NMNAT1Q9HAN9 279 aaPredicted RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 SCPEP1Q9HB40 452 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 CFAP20Q9Y6A4 193 aaKnown RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 DOCK6Q96HP0 2047 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 KIAA0100Q14667 2235 aaKnown RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 LZTS3O60299 673 aaPredicted RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 CSF2P04141 144 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 IGFBP1P08833 259 aaPredicted RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 PRKAG1P54619 331 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 GRM7Q14831 915 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 PNCKQ6P2M8 343 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 PAMR1Q6UXH9 720 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 BCDIN3DQ7Z5W3 292 aaKnown RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 CACUL1Q86Y37 369 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 RIT1Q92963 219 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 OTUB1Q96FW1 271 aaPredicted RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 BHLHE41Q9C0J9 482 aaPredicted RBP15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 ANKHQ9HCJ1 492 aa15.74■□□□□ 0.11
CDC42EP4-201ENST00000335793 QSOX1O00391 747 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 PSIP1O75475 530 aaKnown RBP15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 FCER2P06734 321 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 CHMP24386 653 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 SLC15A1P46059 708 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 SOX9P48436 509 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 CRISP1P54107 249 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 KRR1Q13601 381 aaKnown RBP15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 SLCO4C1Q6ZQN7 724 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 CPXM2Q8N436 756 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 ST13P5Q8NFI4 369 aaPredicted RBP15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 DEDD2Q8WXF8 326 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 EXOSC8Q96B26 276 aaKnown RBP15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 CRELD1Q96HD1 420 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 DEFB118Q96PH6 123 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 SPATA9Q9BWV2 254 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 BTBD2Q9BX70 525 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 ASPNQ9BXN1 380 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 POLR2J2Q9GZM3 115 aaKnown RBP15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 SLA2Q9H6Q3 261 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 TVP23BQ9NYZ1 205 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 SNX7Q9UNH6 387 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 SH2B3Q9UQQ2 575 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 HSPB11Q9Y547 144 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 PIPSLA2A3N6 862 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 ARHGEF9O43307 516 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 APOL3O95236 402 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 YES1P07947 543 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 UGT2B10P36537 528 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 AKR1D1P51857 326 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 FRMPD2BQ6IN97 320 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 ZNF517Q6ZMY9 492 aaPredicted RBP15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 TSEN54Q7Z6J9 526 aaKnown RBP15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 CELF5Q8N6W0 485 aaKnown RBP15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 OR8H1Q8NGG4 311 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 MARC2Q969Z3 335 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 COQ8BQ96D53 544 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 SLC6A16Q9GZN6 736 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 DYRK4Q9NR20 520 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 ACER3Q9NUN7 267 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 GULP1Q9UBP9 304 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 WNT6Q9Y6F9 365 aa15.73■□□□□ 0.11
CDC42EP4-201ENST00000335793 ENTPD6O75354 484 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 AP2A2O94973 939 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 C1GALT1C1LP0DN25 315 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 PSMA1P25786 263 aaKnown RBP15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 PTX3P26022 381 aaPredicted RBP15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 GPC1P35052 558 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 GPR1P46091 355 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 DCST1Q5T197 706 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 SLC39A11Q8N1S5 342 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 TRAM1L1Q8N609 369 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 TCEANCQ8N8B7 351 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 XAGE5Q8WWM1 108 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 FBXL12Q9NXK8 326 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 ENPP4Q9Y6X5 453 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 LINC01387J3KSC0 135 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 TLR4O00206 839 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 WWP2O00308 870 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 GPR37L1O60883 481 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 TIMP2P16035 220 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 PIK3CBP42338 1070 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 TARDBPQ13148 414 aaKnown RBP eCLIP15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 ZNF630Q2M218 657 aaPredicted RBP15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 BTBD16Q32M84 506 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 C16orf62Q7Z3J2 963 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 OR8H3Q8N146 312 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 SLC30A2Q9BRI3 323 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 EFCAB11Q9BUY7 163 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 HDHD5Q9BXW7 423 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 ENOPH1Q9UHY7 261 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 NRG2O14511 850 aaPredicted RBP15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 PDPK1O15530 556 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 CXCL14O95715 111 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 NPPBP16860 134 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 ST8SIA6P61647 398 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 CNTN1Q12860 1018 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 YIF1BQ5BJH7 314 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 TCEAL4Q96EI5 215 aa15.72■□□□□ 0.11
CDC42EP4-201ENST00000335793 SEMA3GQ9NS98 782 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms