RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 KCNC4Q03721 635 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 TLE3Q04726 772 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CHRNA6Q15825 494 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CNIH2Q6PI25 160 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 MYLIPQ8WY64 445 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 FAM46BQ96A09 425 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 B3GAT2Q9NPZ5 323 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 ENPP5Q9UJA9 477 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 UBE2J1Q9Y385 318 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CEPT1Q9Y6K0 416 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 HSPE1-MOB4S4R3N1 261 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 TEX51A0A1B0GUA7 166 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 RAB19A4D1S5 217 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PRAMEF2O60811 474 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 MITFO75030 526 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CCNOP22674 350 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 KCNJ5P48544 419 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PITPNBP48739 271 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 HTD2P86397 168 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 C2orf76Q3KRA6 126 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 RAB41Q5JT25 222 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 HES5Q5TA89 166 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 OR4K1Q8NGD4 311 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PHOSPHO1Q8TCT1 267 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 BCL7BQ9BQE9 202 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CD244Q9BZW8 370 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 MAF1Q9H063 256 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 DPEP2Q9H4A9 486 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PLEKHA3Q9HB20 300 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SDHAF3Q9NRP4 125 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 B3GALT1Q9Y5Z6 326 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PPP1R11O60927 126 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 DHPSP49366 369 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 HYAL2Q12891 473 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 COQ5Q5HYK3 327 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 SUMF2Q8NBJ7 301 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PLD4Q96BZ4 506 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 MFFQ9GZY8 342 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PCDHGA6Q9Y5G7 932 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 RPS10-NUDT3A0A1W2PQS6 291 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 TRAPPC13A5PLN9 417 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 GPR25O00155 361 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 EEDO75530 441 aaKnown RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CFHP08603 1231 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CBSLP0DN79 551 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PROZP22891 400 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CBSP35520 551 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 RPS10P46783 165 aaKnown RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 OR4D2P58180 307 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CCINQ13939 588 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 RAB11BQ15907 218 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PAPD4Q6PIY7 484 aaKnown RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 LRR1Q96L50 414 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 TWNKQ96RR1 684 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CDC6Q99741 560 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CCM2Q9BSQ5 444 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 SYNPO2LQ9H987 977 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 BRF2Q9HAW0 419 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 REV1Q9UBZ9 1251 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 WNT10BO00744 389 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 SULT1B1O43704 296 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF821O75541 412 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CNOT4O95628 575 aaKnown RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 ARL2P36404 184 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 TGM4P49221 684 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CLRN1P58418 232 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 SOWAHAQ2M3V2 549 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PCGF3Q3KNV8 242 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 RNASE10Q5GAN6 216 aaKnown RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 SHFQ7M4L6 423 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CPA6Q8N4T0 437 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 KIAA1191Q96A73 305 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 NUS1Q96E22 293 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF419Q96HQ0 510 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 SAMD10Q9BYL1 202 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 NTN4Q9HB63 628 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 IL21RQ9HBE5 538 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 DEC1Q9P2X7 70 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PPRC1Q5VV67 1664 aaKnown RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 ATP6V1G2-DDX39BF2Z307 99 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 H2BFMP0C1H6 154 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 GP1BBP13224 206 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CSKP41240 450 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 SF3A2Q15428 464 aaKnown RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 GRIK5Q16478 980 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 AMZ1Q400G9 498 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 GPR33Q49SQ1 333 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CCDC71Q8IV32 467 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF619Q8N2I2 560 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 ZSCAN4Q8NAM6 433 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 KLK6Q92876 244 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 OR6C2Q9NZP2 312 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 KCTD3Q9Y597 815 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PSAT1Q9Y617 370 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 DEPDC5O75140 1603 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 RHPN2P1A8MT19 583 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 OR12D1P0DN82 309 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 ACRP10323 421 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms