RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 OR52P1PQ8NH57 321 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 BCL7CQ8WUZ0 217 aaPredicted RBP13.08□□□□□ -0.31
SYNE3-201ENST00000334258 WACQ9BTA9 647 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 POLR2J3Q9H1A7 115 aaKnown RBP13.08□□□□□ -0.31
SYNE3-201ENST00000334258 LSM2Q9Y333 95 aaKnown RBP13.08□□□□□ -0.31
SYNE3-201ENST00000334258 ISM1B1AKI9 464 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 LZTS3O60299 673 aaPredicted RBP13.08□□□□□ -0.32
SYNE3-201ENST00000334258 FZD6O60353 706 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 TBL1XO60907 577 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 ETHE1O95571 254 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 PIPP12273 146 aaPredicted RBP13.08□□□□□ -0.32
SYNE3-201ENST00000334258 SELPP16109 830 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 CD22P20273 847 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 ITGB7P26010 798 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 SLC11A1P49279 550 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 MLLT11Q13015 90 aaPredicted RBP13.08□□□□□ -0.32
SYNE3-201ENST00000334258 MEDAGQ5VYS4 303 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 ZFP41Q8N8Y5 198 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 GPR26Q8NDV2 337 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 HDHD2Q9H0R4 259 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 POLMQ9NP87 494 aaPredicted RBP13.08□□□□□ -0.32
SYNE3-201ENST00000334258 THSD1Q9NS62 852 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 GPATCH2Q9NW75 528 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 GSTK1Q9Y2Q3 226 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 C5orf58C9J3I9 102 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 SAP18O00422 153 aaKnown RBP13.08□□□□□ -0.32
SYNE3-201ENST00000334258 SLC30A4O14863 429 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 OSMP13725 252 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 RHCEP18577 417 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 TIGD3Q6B0B8 471 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 CXorf57Q6NSI4 855 aaKnown RBP13.08□□□□□ -0.32
SYNE3-201ENST00000334258 ASB11Q8WXH4 323 aa13.08□□□□□ -0.32
SYNE3-201ENST00000334258 CIDECQ96AQ7 238 aaPredicted RBP13.08□□□□□ -0.32
SYNE3-201ENST00000334258 ZBED6CLQ96FA7 236 aaPredicted RBP13.08□□□□□ -0.32
SYNE3-201ENST00000334258 MTMR11A4FU01 709 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 I3L521 148 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 SGTAO43765 313 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 HPGDSO60760 199 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 NR2F6P10588 404 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 SLC6A12P48065 614 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 P2RY14Q15391 338 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 SLC5A12Q1EHB4 618 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 ATP13A5Q4VNC0 1218 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 ADGRF1Q5T601 910 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 OR2G6Q5TZ20 316 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 FAM180BQ6P0A1 224 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 DEF8Q6ZN54 512 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 WDR53Q7Z5U6 358 aaPredicted RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 GATAD2BQ8WXI9 593 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 SCPEP1Q9HB40 452 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 SLC25A19Q9HC21 320 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 ZDHHC3Q9NYG2 299 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 ANGPT4Q9Y264 503 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 LEUTXA8MZ59 168 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 SMAD6O43541 496 aaKnown RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 ARSBP15848 533 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 EVI2BP34910 448 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 RRAS2P62070 204 aaPredicted RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 MC1RQ01726 317 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 TNK1Q13470 666 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 TOR2AQ5JU69 321 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 DCST1Q5T197 706 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 HECTD3Q5T447 861 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 RFLNAQ6ZTI6 216 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 LAS2Q8IYD9 372 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 OR52N2Q8NGI0 321 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 OR8J1Q8NGP2 316 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 TTC9Q92623 222 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 MSLNLQ96KJ4 702 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 KATNB1Q9BVA0 655 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 PPIL3Q9H2H8 161 aaKnown RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 COL4A4P53420 1690 aaPredicted RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 GREB1Q4ZG55 1949 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 SLC38A8A6NNN8 435 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 POU3F3P20264 500 aaPredicted RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 M6PRP20645 277 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 CST5P28325 142 aaPredicted RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 NUDT1P36639 197 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 AP1S1P61966 158 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 RPS25P62851 125 aaKnown RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 ZNF385BQ569K4 471 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 CDKL4Q5MAI5 379 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 SERPINA13PQ6UXR4 307 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 IDO2Q6ZQW0 420 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 THOC6Q86W42 341 aaKnown RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 LILRB2Q8N423 598 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 UPRTQ96BW1 309 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 GTPBP2Q9BX10 602 aaKnown RBP13.07□□□□□ -0.32
SYNE3-201ENST00000334258 WASH6PQ9NQA3 447 aa13.07□□□□□ -0.32
SYNE3-201ENST00000334258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.06□□□□□ -0.32
SYNE3-201ENST00000334258 PFN3P60673 137 aa13.06□□□□□ -0.32
SYNE3-201ENST00000334258 ALDH6A1Q02252 535 aaKnown RBP13.06□□□□□ -0.32
SYNE3-201ENST00000334258 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
SYNE3-201ENST00000334258 LIPJQ5W064 366 aa13.06□□□□□ -0.32
SYNE3-201ENST00000334258 USP45Q70EL2 814 aa13.06□□□□□ -0.32
SYNE3-201ENST00000334258 CLP1Q92989 425 aaKnown RBP13.06□□□□□ -0.32
SYNE3-201ENST00000334258 PPCDCQ96CD2 204 aa13.06□□□□□ -0.32
SYNE3-201ENST00000334258 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms