RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 RPIAP49247 311 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 ACLYP53396 1101 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 TNK1Q13470 666 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 GANABQ14697 944 aaKnown RBP11.33□□□□□ -0.6
LIMK2-202ENST00000333611 KLHL22Q53GT1 634 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 PDZD3Q86UT5 571 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 ZZZ3Q8IYH5 903 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 HMGB4Q8WW32 186 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 GATAD2BQ8WXI9 593 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 APIPQ96GX9 242 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 ERMAPQ96PL5 475 aaPredicted RBP11.33□□□□□ -0.6
LIMK2-202ENST00000333611 TRIB3Q96RU7 358 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 MGME1Q9BQP7 344 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 ACPTQ9BZG2 426 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 RHCGQ9UBD6 479 aa11.33□□□□□ -0.6
LIMK2-202ENST00000333611 A0A0A6YYJ9 748 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SH3D21A4FU49 640 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 MID1O15344 667 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 PEPDP12955 493 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 DGKAP23743 735 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 MAPKAPK2P49137 400 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 PSPHP78330 225 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 OC90Q02509 493 aaPredicted RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 ASAH1Q13510 395 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 C1DQ13901 141 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 BICRALQ6AI39 1079 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 IL20RBQ6UXL0 311 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 RDH10Q8IZV5 341 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 UFD1Q92890 307 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 ARMC5Q96C12 935 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 AP2M1Q96CW1 435 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 WDR77Q9BQA1 342 aaPredicted RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 GSDMCQ9BYG8 508 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 GPR62Q9BZJ7 368 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 RBFOX1Q9NWB1 397 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SAMD4AQ9UPU9 718 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 EEF1E1O43324 174 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 AKAP8O43823 692 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 CLDN9O95484 217 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 GBAP04062 536 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 RRASP10301 218 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 POU3F2P20265 443 aaPredicted RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 DNAJA1P31689 397 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 TBCEQ15813 527 aaPredicted RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 C9orf152Q5JTZ5 239 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 PAQR6Q6TCH4 344 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 GPR149Q86SP6 731 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 CCDC71Q8IV32 467 aaPredicted RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 PM20D2Q8IYS1 436 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 ZBTB2Q8N680 514 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 NXPE2Q96DL1 559 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 LRRC46Q96FV0 321 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 ZNF578Q96N58 590 aaPredicted RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SECISBP2Q96T21 854 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 CD244Q9BZW8 370 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SIRT5Q9NXA8 310 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SLC39A1Q9NY26 324 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 ATXN7L1Q9ULK2 861 aaPredicted RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SLC6A14Q9UN76 642 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 OR6C74A6NCV1 312 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 BET1O15155 118 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 NARSO43776 548 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 OAZ2O95190 189 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 ALPPP05187 535 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 HIST1H2AGP0C0S8 130 aaPredicted RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SYN1P17600 705 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 HIST1H2ADP20671 130 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 LCN1P31025 176 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 CACNG1Q06432 222 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SLC9A5Q14940 896 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 NCF4Q15080 339 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 ARTNQ5T4W7 220 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 TMEM145Q8NBT3 493 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 OR7G3Q8NG95 312 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 MED8Q96G25 268 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 PAWRQ96IZ0 340 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 HIST1H2AHQ96KK5 128 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 UROC1Q96N76 676 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 HIST1H2AJQ99878 128 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 CMSS1Q9BQ75 279 aaKnown RBP11.32□□□□□ -0.6
LIMK2-202ENST00000333611 H2AFJQ9BTM1 129 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 MAGEH1Q9H213 219 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SERHLQ9NQF3 203 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 FNIP2Q9P278 1114 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SLC22A14Q9Y267 594 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 PCDHGB1Q9Y5G3 927 aa11.32□□□□□ -0.6
LIMK2-202ENST00000333611 SLC22A23A1A5C7 686 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 TNFRSF11BO00300 401 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 YKT6O15498 198 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 TBL1XO60907 577 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 ANXA5P08758 320 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 FPR1P21462 350 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 HLA-DMAP28067 261 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 CRATP43155 626 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 MAGEA2P43356 314 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms