RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 HMOX2P30519 316 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 MAPK12P53778 367 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 RNF4P78317 190 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 IFFO1Q0D2I5 559 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 COMMD6Q7Z4G1 85 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 GPALPP1Q8IXQ4 340 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 RIBC1Q8N443 379 aaPredicted RBP25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 CCNYL1Q8N7R7 359 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 PSMG3-AS1Q96PY0 264 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 LIN28AQ9H9Z2 209 aaKnown RBP25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 VPS29Q9UBQ0 182 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 SEC14L3Q9UDX4 400 aa25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 KLF13Q9Y2Y9 288 aaPredicted RBP25.66■■□□□ 1.7
ATPAF1-201ENST00000329231 USP9XQ93008 2570 aaPredicted RBP25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 TLDC2A0PJX2 215 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 CCDC151A5D8V7 595 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 PLIN3O60664 434 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 ULK1O75385 1050 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 ENO1P06733 434 aaKnown RBP25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 KRT4P19013 534 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 CSTF3Q12996 717 aaKnown RBP25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 PNPLA5Q7Z6Z6 429 aaPredicted RBP25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 RDH11Q8TC12 318 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 ASB15Q8WXK1 588 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 FBXL20Q96IG2 436 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 FRMD6Q96NE9 622 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 ROPN1BQ9BZX4 212 aaPredicted RBP25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 ROPN1Q9HAT0 212 aaPredicted RBP25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 TEX10Q9NXF1 929 aaPredicted RBP25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 ERVK-11Q9UQG0 969 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 HIVEP3Q5T1R4 2406 aa25.65■■□□□ 1.7
ATPAF1-201ENST00000329231 PTPN13Q12923 2485 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 WASHC1A8K0Z3 465 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 A8MVJ9 347 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 WWP2O00308 870 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 UNC5CO95185 931 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 ESRRBO95718 433 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 SLC35E2P0CK97 266 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 PIK3R1P27986 724 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 GALNSP34059 522 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 HK2P52789 917 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 KCNK10P57789 538 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 ALDH6A1Q02252 535 aaKnown RBP25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 SRSF11Q05519 484 aaKnown RBP25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 GALNT1Q10472 559 aaPredicted RBP25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 TBL3Q12788 808 aaKnown RBP25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 C4orf17Q53FE4 359 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 TCHHL1Q5QJ38 904 aaPredicted RBP25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 NDUFAF5Q5TEU4 345 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 C16orf47Q6ZP98 133 aaPredicted RBP25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 CCDC63Q8NA47 563 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 RIT1Q92963 219 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 RASL10BQ96S79 203 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 HBEGFQ99075 208 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 GSTO2Q9H4Y5 243 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 HPF1Q9NWY4 346 aa25.64■■□□□ 1.7
ATPAF1-201ENST00000329231 COL12A1Q99715 3063 aa25.64■■□□□ 1.69
ATPAF1-201ENST00000329231 HECTD1Q9ULT8 2610 aa25.64■■□□□ 1.69
ATPAF1-201ENST00000329231 PGRMC2O15173 223 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 IGKV3-11P04433 115 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 SLC18A2Q05940 514 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 SPRED3Q2MJR0 410 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 DGAT2L6Q6ZPD8 337 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 C4orf33Q8N1A6 199 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 GBP7Q8N8V2 638 aaPredicted RBP25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 SREK1Q8WXA9 508 aaKnown RBP25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 UCN3Q969E3 161 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 CNPPD1Q9BV87 410 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 TIMMDC1Q9NPL8 285 aa25.63■■□□□ 1.69
ATPAF1-201ENST00000329231 KLRC4-KLRK1H3BQV0 150 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 STSP08842 583 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 DNAJB13P59910 316 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 ZNF267Q14586 743 aaPredicted RBP25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 KRTCAP3Q53RY4 240 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 CFAP157Q5JU67 520 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 ZGRF1Q86YA3 2104 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 C1orf52Q8N6N3 182 aaKnown RBP25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 POGLUT1Q8NBL1 392 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 OR4K14Q8NGD5 310 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 NUBPLQ8TB37 319 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 AGAP11Q8TF27 550 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 MID1IP1Q9NPA3 183 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 LGALS13Q9UHV8 139 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 MID2Q9UJV3 735 aa25.62■■□□□ 1.69
ATPAF1-201ENST00000329231 H3BQF6 201 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 LDLRP01130 860 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 CPA3P15088 417 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 NAGLUP54802 743 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 ERVK-8P63133 956 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 RBPJQ06330 500 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 FAM219BQ5XKK7 198 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 IL20RBQ6UXL0 311 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 CHTF18Q8WVB6 975 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 TMEM109Q9BVC6 243 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 OXSMQ9NWU1 459 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 ERVK-19Q9WJR5 959 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 PCDHA9Q9Y5H5 950 aa25.61■■□□□ 1.69
ATPAF1-201ENST00000329231 SETXQ7Z333 2677 aaKnown RBP25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 A0A1B0GUH1 482 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms