RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ATAT1Q5SQI0 421 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 TMIGD1Q6UXZ0 262 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 ZNF730Q6ZMV8 503 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 LAPTM4BQ86VI4 370 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 REM2Q8IYK8 340 aaPredicted RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 PCSK9Q8NBP7 692 aaKnown RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 DUSP18Q8NEJ0 188 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 SNAPC3Q92966 411 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 SCAMP4Q969E2 229 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 TMEM159Q96B96 161 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 TMEM175Q9BSA9 504 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 RBFOX1Q9NWB1 397 aaKnown RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 TVP23BQ9NYZ1 205 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 CARD8Q9Y2G2 431 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 GPSM3Q9Y4H4 160 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 YIPF1Q9Y548 306 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 BACE2Q9Y5Z0 518 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 SPIN1Q9Y657 262 aaPredicted RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 SAP18O00422 153 aaKnown RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 PRKYO43930 277 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 UQCRC2P22695 453 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 CTSOP43234 321 aaPredicted RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 MAN2A2P49641 1150 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 PRKCZQ05513 592 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 NOGQ13253 232 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 SYTL3Q4VX76 610 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 SLC25A30Q5SVS4 291 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 CELF5Q8N6W0 485 aaKnown RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 ARL14EPQ8N8R7 260 aaPredicted RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 DEDD2Q8WXF8 326 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 TEFMQ96QE5 360 aaKnown RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 SOSTQ9BQB4 213 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 RSPO3Q9BXY4 272 aaPredicted RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 POLDIP3Q9BY77 421 aaKnown RBP15.9■□□□□ 0.14
SSH1-201ENST00000326470 RERGLQ9H628 205 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 DMRT3Q9NQL9 472 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 ALG5Q9Y673 324 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 ANAPC1Q9H1A4 1944 aa15.9■□□□□ 0.14
SSH1-201ENST00000326470 C5orf58C9J3I9 102 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 TLX2O43763 284 aaPredicted RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 TGFB1P01137 390 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 TP53P04637 393 aaPredicted RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 SLC2A2P11168 524 aaPredicted RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 APEX1P27695 318 aaKnown RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 DGKGP49619 791 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 TRIQKQ629K1 86 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 C19orf18Q8NEA5 215 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 SUN5Q8TC36 379 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 SLC38A5Q8WUX1 472 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 FAM83CQ9BQN1 747 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 NLNQ9BYT8 704 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 CPEB1Q9BZB8 566 aaKnown RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 OR51B5Q9H339 312 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 PPP1R3EQ9H7J1 279 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 YARS2Q9Y2Z4 477 aaKnown RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 CHRM5P08912 532 aaPredicted RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 PSKH1P11801 424 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 DDX5P17844 614 aaKnown RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 TNNI3P19429 210 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 PREPP48147 710 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 ATN1P54259 1190 aaPredicted RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 WNT4P56705 351 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 RPS25P62851 125 aaKnown RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 PPP3R1P63098 170 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 ALDH6A1Q02252 535 aaKnown RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 TARDBPQ13148 414 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSH1-201ENST00000326470 SLBPQ14493 270 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSH1-201ENST00000326470 FAM214AQ32MH5 1076 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 SYT14P1Q58G82 188 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 IER5LQ5T953 404 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 PDZD3Q86UT5 571 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 IQCF1Q8N6M8 205 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 OR52P1PQ8NH57 321 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 ZNF461Q8TAF7 563 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 FIBINQ8TAL6 211 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 C1GALT1C1Q96EU7 318 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 SLC6A16Q9GZN6 736 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 ZDHHC6Q9H6R6 413 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 CXorf36Q9H7Y0 433 aa15.89■□□□□ 0.13
SSH1-201ENST00000326470 SF3B6Q9Y3B4 125 aaKnown RBP15.89■□□□□ 0.13
SSH1-201ENST00000326470 AGRPO00253 132 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 TSPAN6O43657 245 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 BCHEP06276 602 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 FAM157BP0CG42 384 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 CCND3P30281 292 aaPredicted RBP15.88■□□□□ 0.13
SSH1-201ENST00000326470 OR3A3P47888 321 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 MADCAM1Q13477 382 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 TPBGQ13641 420 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 C3orf38Q5JPI3 329 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 MZT2BQ6NZ67 158 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 C22orf39Q6P5X5 142 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 Q8N402 240 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 LILRA3Q8N6C8 439 aaPredicted RBP15.88■□□□□ 0.13
SSH1-201ENST00000326470 SYT14Q8NB59 555 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 WDR34Q96EX3 536 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 ZBED6CLQ96FA7 236 aaPredicted RBP15.88■□□□□ 0.13
SSH1-201ENST00000326470 CITED4Q96RK1 184 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 FUZQ9BT04 418 aa15.88■□□□□ 0.13
SSH1-201ENST00000326470 GTPBP2Q9BX10 602 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms