RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.26□□□□□ -0.453e-65■■■□□ 17.1
HMGCS1-201ENST00000325110 ENKURQ8TC29 256 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 MTERF3Q96E29 417 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 TMEM80Q96HE8 168 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 AIF1LQ9BQI0 150 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 BTBD2Q9BX70 525 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 TM7SF3Q9NS93 570 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 FABP12A6NFH5 140 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 HIDE1A8MVS5 230 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 SEMG1P04279 462 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 NR2F6P10588 404 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 C6P13671 934 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 UQCRC2P22695 453 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 TIE1P35590 1138 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 RORCP51449 518 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 LSM11P83369 360 aaKnown RBP eCLIP12.25□□□□□ -0.456e-13■□□□□ 8.6
HMGCS1-201ENST00000325110 HOXC5Q00444 222 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 CD83Q01151 205 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF91Q05481 1191 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 SEC23BQ15437 767 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 LRRC26Q2I0M4 334 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 DEFB115Q30KQ5 88 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 LRIT3Q3SXY7 679 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 PIK3R3Q92569 461 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 ANKHQ9HCJ1 492 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 MRPS23Q9Y3D9 190 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 SDK1Q7Z5N4 2213 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 TBC1D3BA6NDS4 549 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 CASKO14936 926 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 MPZL2O60487 215 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 CLCNKAP51800 687 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 MVDP53602 400 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 PRSS53Q2L4Q9 553 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 CNKSR3Q6P9H4 555 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 WDR53Q7Z5U6 358 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 LHFPL3Q86UP9 236 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 GATAD2BQ8WXI9 593 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 TBC1D20Q96BZ9 403 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF689Q96CS4 500 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 SLC35G5Q96KT7 338 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 TEFMQ96QE5 360 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 RC3H2Q9HBD1 1191 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 TEX10Q9NXF1 929 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 ATP6V1HQ9UI12 483 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 TMA7Q9Y2S6 64 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 CYP17A1P05093 508 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 PCSK2P16519 638 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 CD72P21854 359 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 PPM1AP35813 382 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 NCBP2P52298 156 aaKnown RBP eCLIP12.25□□□□□ -0.451e-7■□□□□ 11
HMGCS1-201ENST00000325110 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■■□□ 18.6
HMGCS1-201ENST00000325110 FAM71E1Q6IPT2 247 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 KIAA1161Q6NSJ0 714 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 AMZ2Q86W34 360 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 CXorf40AQ8TE69 158 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 JPH3Q8WXH2 748 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 FERD3LQ96RJ6 166 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 PSD2Q9BQI7 771 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 YIPF2Q9BWQ6 316 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 RACGAP1Q9H0H5 632 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 ANKRA2Q9H9E1 313 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 SLC9A8Q9Y2E8 581 aa12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 RPL36Q9Y3U8 105 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-201ENST00000325110 COL4A4P53420 1690 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 CCDC182A6NF36 153 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 RFXAPO00287 272 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 MRPS14O60783 128 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 OSMP13725 252 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 CSTF2P33240 577 aaKnown RBP eCLIP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 UGT2B10P36537 528 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 VIPR2P41587 438 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 AVPR1BP47901 424 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TAS2R41P59536 307 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 PUM1Q14671 1186 aaKnown RBP eCLIP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 FAM214AQ32MH5 1076 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TBRG1Q3YBR2 411 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 NXNL2Q5VZ03 156 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 LAPTM4BQ86VI4 370 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TMC8Q8IU68 726 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 PGBD3Q8N328 593 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 KAT2AQ92830 837 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 UCN3Q969E3 161 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 GFM1Q96RP9 751 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 PHOX2BQ99453 314 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TM9SF2Q99805 663 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 A0A1W2PQ09 198 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 PLPP1O14494 284 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 PLD2O14939 933 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 SLC35G4P0C7Q5 338 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 ACP5P13686 325 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 MMP12P39900 470 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 EIF4HQ15056 248 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 C9orf64Q5T6V5 341 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TUBA3EQ6PEY2 450 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 SYT14Q8NB59 555 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 OR4K5Q8NGD3 323 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 SMPDL3AQ92484 453 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 ZBED6CLQ96FA7 236 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 ZSWIM3Q96MP5 696 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 OR51I1Q9H343 314 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms