RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 HDXQ7Z353 690 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 TRIM46Q7Z4K8 759 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 RPS19BP1Q86WX3 136 aaKnown RBP17.45■□□□□ 0.38
CIRBP-201ENST00000320936 ST13P4Q8IZP2 240 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-201ENST00000320936 MMP21Q8N119 569 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 GOLGA6L1Q8N7Z2 621 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 MORN4Q8NDC4 146 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 OR4K14Q8NGD5 310 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 SLC2A12Q8TD20 617 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 PTPMT1Q8WUK0 201 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-201ENST00000320936 TWIST2Q8WVJ9 160 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 KLHL29Q96CT2 875 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 CNPPD1Q9BV87 410 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 CDCP1Q9H5V8 836 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 PFDN4Q9NQP4 134 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 NKIRAS1Q9NYS0 192 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 POLR3HQ9Y535 204 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-201ENST00000320936 PCDHA9Q9Y5H5 950 aa17.45■□□□□ 0.38
CIRBP-201ENST00000320936 CROCCQ5TZA2 2017 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 FCHO1O14526 889 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 MAN1A2O60476 641 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 SEC22BO75396 215 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 ERAL1O75616 437 aaKnown RBP17.44■□□□□ 0.38
CIRBP-201ENST00000320936 IL3P08700 152 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 PLA2G2AP14555 144 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 BGNP21810 368 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 RAE1P78406 368 aaKnown RBP17.44■□□□□ 0.38
CIRBP-201ENST00000320936 OC90Q02509 493 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-201ENST00000320936 ZNF169Q14929 603 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-201ENST00000320936 TLR1Q15399 786 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 H3F3CQ6NXT2 135 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 Q6ZS92 163 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 CLYBLQ8N0X4 340 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 APCDD1LQ8NCL9 501 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 CATSPER1Q8NEC5 780 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 SUN3Q8TAQ9 357 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 DOK4Q8TEW6 326 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 RIT1Q92963 219 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 TM4SF18Q96CE8 201 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 ART5Q96L15 291 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 UTP23Q9BRU9 249 aaKnown RBP17.44■□□□□ 0.38
CIRBP-201ENST00000320936 ANKRD10Q9NXR5 420 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 DLGAP4Q9Y2H0 992 aa17.44■□□□□ 0.38
CIRBP-201ENST00000320936 OR5H15A6NDH6 313 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 GABRR3A8MPY1 467 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 TMEM114B3SHH9 223 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 PYCARD-AS1I3L0S3 204 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 SKAP2O75563 359 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-201ENST00000320936 LYPLA1O75608 230 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-201ENST00000320936 DHRS4L1P0CG22 281 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 XKP51811 444 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 ZNF763Q0D2J5 394 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 GALNTL6Q49A17 601 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 HSDL2Q6YN16 418 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 HOMEZQ8IX15 550 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 ZNF321PQ8N8H1 164 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 Q8NA96 180 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 OR1N1Q8NGS0 311 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 C16orf78Q8WTQ4 265 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 TLCD1Q96CP7 247 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 NPAS2Q99743 824 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 LRTM1Q9HBL6 345 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 PSME2Q9UL46 239 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 DNAJC15Q9Y5T4 150 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 ZNF780BQ9Y6R6 833 aa17.43■□□□□ 0.38
CIRBP-201ENST00000320936 TRAV17A0A0B4J275 112 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 A0A1W2PS29 197 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 PIP5K1BO14986 540 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 ZFAND5O76080 213 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 SORBS2O94875 1100 aaKnown RBP17.42■□□□□ 0.38
CIRBP-201ENST00000320936 DDAH2O95865 285 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 SLC35E2P0CK97 266 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 CPMP14384 443 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 H2AFXP16104 143 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-201ENST00000320936 NT5EP21589 574 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 GRK2P25098 689 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 ARRB2P32121 409 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 TNFSF10P50591 281 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 ABCE1P61221 599 aaKnown RBP17.42■□□□□ 0.38
CIRBP-201ENST00000320936 ERVK-8P63133 956 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 RPL38P63173 70 aaKnown RBP17.42■□□□□ 0.38
CIRBP-201ENST00000320936 ZNF267Q14586 743 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-201ENST00000320936 HEPACAMQ14CZ8 416 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 AGBL2Q5U5Z8 902 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 SLC48A1Q6P1K1 146 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 DGAT2L6Q6ZPD8 337 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 LGI4Q8N135 537 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 CPT1CQ8TCG5 803 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 HAS2Q92819 552 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 RNF32Q9H0A6 362 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 C1orf109Q9NX04 203 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 ZNF223Q9UK11 482 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-201ENST00000320936 UTS2RQ9UKP6 389 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 PPIEQ9UNP9 301 aaKnown RBP17.42■□□□□ 0.38
CIRBP-201ENST00000320936 ERVK-19Q9WJR5 959 aa17.42■□□□□ 0.38
CIRBP-201ENST00000320936 ITM2AO43736 263 aa17.41■□□□□ 0.38
CIRBP-201ENST00000320936 FGF4P08620 206 aa17.41■□□□□ 0.38
CIRBP-201ENST00000320936 PORP16435 677 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-201ENST00000320936 FEN1P39748 380 aaKnown RBP17.41■□□□□ 0.38
CIRBP-201ENST00000320936 MLF1P58340 268 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms