RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 TUBA1CQ9BQE3 449 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 POLR2J2Q9GZM3 115 aaKnown RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 POLR2J3Q9H1A7 115 aaKnown RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 OSGEPL1Q9H4B0 414 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 COMMD3-BMI1R4GMX3 469 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 MN1Q10571 1320 aaPredicted RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 NUMA1Q14980 2115 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 RNF103-CHMP3A0A140T963 221 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 SYT5O00445 386 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 PGRMC2O15173 223 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 GALR3O60755 368 aaPredicted RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 CPSF4O95639 269 aaKnown RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 CBLP22681 906 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 CD38P28907 300 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 RPL5P46777 297 aaKnown RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 CAPZBP47756 277 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 CA13Q8N1Q1 262 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 ZDHHC1Q8WTX9 485 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 RASSF5Q8WWW0 418 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 GEMIN6Q8WXD5 167 aaKnown RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 NR4A3Q92570 626 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 ELP4Q96EB1 424 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 SEPHS2Q99611 448 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 MAPKAP1Q9BPZ7 522 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 C17orf62Q9BQA9 187 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 ACAT2Q9BWD1 397 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 GPR174Q9BXC1 333 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 ACER3Q9NUN7 267 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 ADPRHL2Q9NX46 363 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 SH3BP4Q9P0V3 963 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 FAF1Q9UNN5 650 aaPredicted RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 SATB2Q9UPW6 733 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 CHST2Q9Y4C5 530 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 SNX11Q9Y5W9 270 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 EXPH5Q8NEV8 1989 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 PRUNE2Q8WUY3 3088 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 PDZK1P1A8MUH7 402 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 LMO7DNF2Z398 122 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 TLR4O00206 839 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 FFAR1O14842 300 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 FOXS1O43638 330 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 GMNNO75496 209 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 UBTFL6P0CB48 400 aaPredicted RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 CLK3P49761 638 aaKnown RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 LIMK1P53667 647 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 RGS1Q08116 209 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 RNF220Q5VTB9 566 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 FRMPD2BQ6IN97 320 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 ZDHHC13Q8IUH4 622 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 ST13P4Q8IZP2 240 aaPredicted RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 GALNT4Q8N4A0 578 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 DHRSXQ8N5I4 330 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 FRMD1Q8N878 549 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 CD180Q99467 661 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 BARD1Q99728 777 aaKnown RBP6.76□□□□□ -1.33
NPHP1-201ENST00000316534 NLNQ9BYT8 704 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 TOR3AQ9H497 397 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 RUBCNLQ9H714 662 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 PLCXD1Q9NUJ7 323 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 ANGPT4Q9Y264 503 aa6.76□□□□□ -1.33
NPHP1-201ENST00000316534 A0A0G2JPF8 293 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 HNRNPCL2B2RXH8 293 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 HNRNPCL3B7ZW38 293 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 CASC3O15234 703 aaKnown RBP6.75□□□□□ -1.33
NPHP1-201ENST00000316534 EMC8O43402 210 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 SUV39H1O43463 412 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 PRAMEF10O60809 474 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 TP53P04637 393 aaPredicted RBP6.75□□□□□ -1.33
NPHP1-201ENST00000316534 FHP07954 510 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 ZNF888P0CJ79 500 aaPredicted RBP6.75□□□□□ -1.33
NPHP1-201ENST00000316534 HNRNPCL4P0DMR1 293 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 RHCEP18577 417 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 CERS1P27544 350 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 NR1H2P55055 460 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 EFNB1P98172 346 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 SUZ12Q15022 739 aaKnown RBP6.75□□□□□ -1.33
NPHP1-201ENST00000316534 ELOCQ15369 112 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 IFI44LQ53G44 452 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 TMEM31Q5JXX7 168 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 TTC23Q5W5X9 447 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 VTCN1Q7Z7D3 282 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 MRGPREQ86SM8 312 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 CLEC4FQ8N1N0 589 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 PIK3C3Q8NEB9 887 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 NFKBIDQ8NI38 313 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 MAL2Q969L2 176 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 SLC35B4Q969S0 331 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 ZNF354BQ96LW1 612 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 TRNT1Q96Q11 434 aaKnown RBP6.75□□□□□ -1.33
NPHP1-201ENST00000316534 PIF1Q9H611 641 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 MIEF1Q9NQG6 463 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 TMEM74BQ9NUR3 256 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 MYRFQ9Y2G1 1151 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 PCDHGB3Q9Y5G1 929 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 CEPT1Q9Y6K0 416 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 ENPP4Q9Y6X5 453 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 OR6C74A6NCV1 312 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 ERI3O43414 337 aaKnown RBP6.75□□□□□ -1.33
NPHP1-201ENST00000316534 PLOD3O60568 738 aa6.75□□□□□ -1.33
NPHP1-201ENST00000316534 SRPX2O60687 465 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms