RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 POLR2CP19387 275 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 ITIH1P19827 911 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 RACK1P63244 317 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF763Q0D2J5 394 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TUBA3CQ13748 450 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 LRRC32Q14392 662 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 GAS6Q14393 721 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 IRAK1BP1Q5VVH5 260 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 KIAA1614Q5VZ46 1190 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TNFAIP8L2Q6P589 184 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 RNF130Q86XS8 419 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 ADHFE1Q8IWW8 467 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 OR8J3Q8NGG0 315 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TESCQ96BS2 214 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 REXO5Q96IC2 774 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 CPPED1Q9BRF8 314 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 EFCAB11Q9BUY7 163 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 WDR12Q9GZL7 423 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TP63Q9H3D4 680 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 SLAMF7Q9NQ25 335 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 ERVK13-1Q9NX77 482 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF624Q9P2J8 865 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 FBXW2Q9UKT8 454 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 PCDHGA3Q9Y5H0 932 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TDRD6O60522 2096 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 PLXNA2O75051 1894 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF860A6NHJ4 632 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TFECO14948 347 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ERI3O43414 337 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 UGDHO60701 494 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ERN1O75460 977 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 MFN2O95140 757 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 BCL6P41182 706 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ST13P50502 369 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 CCR8P51685 355 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 CSNK1G2P78368 415 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 OLR1P78380 273 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 CCINQ13939 588 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 CPZQ66K79 652 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SLC22A18ASQ8N1D0 253 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 OR5K1Q8NHB7 308 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 NELL1Q92832 810 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 COL26A1Q96A83 441 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TEFMQ96QE5 360 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF300Q96RE9 604 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SLC35A5Q9BS91 424 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 YTHDF1Q9BYJ9 559 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 PRRG3Q9BZD7 231 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TPK1Q9H3S4 243 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 MRPS30Q9NP92 439 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ACOT13Q9NPJ3 140 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TMEM184CQ9NVA4 438 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 GPR83Q9NYM4 423 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 COLQQ9Y215 455 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SLC17A4Q9Y2C5 497 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TMED5Q9Y3A6 229 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TESMINQ9Y4I5 508 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TRBV5-3A0A0A0MS03 114 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 RGS10O43665 173 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SEMA4FO95754 770 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 PEBP1P30086 187 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 CHI3L1P36222 383 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TRPC1P48995 793 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 RNF144AP50876 292 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 RAB28P51157 221 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SLC35A2P78381 396 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 IFITM2Q01629 132 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 DOC2BQ14184 412 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 AGERQ15109 404 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SPIN4Q56A73 249 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 RPS26P11Q5JNZ5 115 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 AGAP7PQ5VUJ5 663 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 RSBN1Q5VWQ0 802 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 KHDRBS2Q5VWX1 349 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 KLHL17Q6TDP4 642 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 UNC5DQ6UXZ4 953 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SLC9B2Q86UD5 537 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 AKAP14Q86UN6 197 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 LYSMD2Q8IV50 215 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 OR4N5Q8IXE1 308 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SCAIQ8N9R8 606 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ZCCHC10Q8TBK6 192 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 UTP15Q8TED0 518 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 SMPDL3AQ92484 453 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 AIF1LQ9BQI0 150 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 CENPOQ9BU64 300 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 AICDAQ9GZX7 198 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 PALMDQ9NP74 551 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 LHX9Q9NQ69 397 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TRPV5Q9NQA5 729 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 KRT84Q9NSB2 600 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 DDX28Q9NUL7 540 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 DCAF13Q9NV06 445 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 TAAR2Q9P1P5 351 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 RHCGQ9UBD6 479 aa7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ARHGEF17Q96PE2 2063 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF106Q9H2Y7 1883 aaKnown RBP7.22□□□□□ -1.25
TRIM55-202ENST00000315962 PNMA8CA0A1B0GUJ8 204 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 PGRMC2O15173 223 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 AIREO43918 545 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms