RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 ZMAT1Q5H9K5 638 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 COX20Q5RI15 118 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 PRAMEF14Q5SWL7 426 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 PRAMEF13Q5VWM6 474 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 C6orf120Q7Z4R8 191 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 KLBQ86Z14 1044 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 GSDMCQ9BYG8 508 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 BHLHE41Q9C0J9 482 aaPredicted RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 SLITRK2Q9H156 845 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 IMP3Q9NV31 184 aaKnown RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 MUTYHQ9UIF7 546 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 Q9Y3F1 56 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 GPSM3Q9Y4H4 160 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 SLC35G4P0C7Q5 338 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 RPS5P46782 204 aaKnown RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 MTNR1AP48039 350 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 NTRK2Q16620 822 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 RFLNAQ6ZTI6 216 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 FAM109AQ8N4B1 249 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 SLC5A11Q8WWX8 675 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 MRPL48Q96GC5 212 aaKnown RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 BTBD1Q9H0C5 482 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 OR51I1Q9H343 314 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 GON4LQ3T8J9 2241 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 LTBP3Q9NS15 1303 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 LOC105369274A0A096LPK9 316 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 A0A1W2PPK0 400 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 M0R3H8 397 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 MPC1LP0DKB6 136 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 WNT4P56705 351 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 DSG2Q14126 1118 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 C22orf39Q6P5X5 142 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF613Q6PF04 617 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 OR4N4Q8N0Y3 316 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 FATE1Q969F0 183 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 TAC3Q9UHF0 121 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 HCN1O60741 890 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 LAMP2P13473 410 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 DDOSTP39656 456 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 SGSHP51688 502 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 MAZP56270 477 aaKnown RBP12.84□□□□□ -0.35
SEC23A-201ENST00000307712 LMAN2Q12907 356 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF311Q5JNZ3 666 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 PLCZ1Q86YW0 608 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 FAM98AQ8NCA5 519 aaKnown RBP12.84□□□□□ -0.35
SEC23A-201ENST00000307712 IL17RDQ8NFM7 739 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ISG20Q96AZ6 181 aaKnown RBP12.84□□□□□ -0.35
SEC23A-201ENST00000307712 FERD3LQ96RJ6 166 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 TMEM121BQ9BXQ6 578 aaPredicted RBP12.84□□□□□ -0.35
SEC23A-201ENST00000307712 NPAP1Q9NZP6 1156 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ALG5Q9Y673 324 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF780BQ9Y6R6 833 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 TRBV4-1A0A0J9YWV2 114 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 J3QLW9 94 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 EFCAB14O75071 495 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF19P17023 458 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 MAPK9P45984 424 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 TBPL1P62380 186 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF655Q8N720 491 aaPredicted RBP12.84□□□□□ -0.35
SEC23A-201ENST00000307712 DNAJC5GQ8N7S2 189 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 C16orf78Q8WTQ4 265 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF558Q96NG5 402 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 IL17FQ96PD4 163 aa12.84□□□□□ -0.35
SEC23A-201ENST00000307712 STOX2Q9P2F5 926 aaPredicted RBP12.84□□□□□ -0.35
SEC23A-201ENST00000307712 ARID1BQ8NFD5 2236 aaPredicted RBP12.83□□□□□ -0.35
SEC23A-201ENST00000307712 OR7A10O76100 309 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 C8orf89P0DMQ9 161 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 C1GALT1C1LP0DN25 315 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 TIAL1Q01085 375 aaKnown RBP eCLIP12.83□□□□□ -0.368e-7■■□□□ 13.5
SEC23A-201ENST00000307712 FAPQ12884 760 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 METTL2BQ6P1Q9 378 aaKnown RBP12.83□□□□□ -0.36
SEC23A-201ENST00000307712 PROKR2Q8NFJ6 384 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 GINS4Q9BRT9 223 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 IFT27Q9BW83 186 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 GTPBP2Q9BX10 602 aaKnown RBP12.83□□□□□ -0.36
SEC23A-201ENST00000307712 P2RY12Q9H244 342 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 BRD7Q9NPI1 651 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 NUDT15Q9NV35 164 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 MED16Q9Y2X0 877 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 NINQ8N4C6 2090 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 GPR37L1O60883 481 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 KDM4BO94953 1096 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 ALAS2P22557 587 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 MAP4K2Q12851 820 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 TMEM115Q12893 351 aaPredicted RBP12.83□□□□□ -0.36
SEC23A-201ENST00000307712 KCNC3Q14003 757 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 ZNF362Q5T0B9 420 aaPredicted RBP12.83□□□□□ -0.36
SEC23A-201ENST00000307712 RD3Q7Z3Z2 195 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 OR8J2Q8NGG1 315 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 CYB5D2Q8WUJ1 264 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 ASB11Q8WXH4 323 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 FOXJ1Q92949 421 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 ZIC5Q96T25 663 aa12.83□□□□□ -0.36
SEC23A-201ENST00000307712 FUZQ9BT04 418 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms