RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ARAP2Q8WZ64 1704 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 PDCD5O14737 125 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 AURKAO14965 403 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 CHRM5P08912 532 aaPredicted RBP10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 SPARCP09486 303 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 F3P13726 295 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 OR1E2P47887 323 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 GMFBP60983 142 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 E2F1Q01094 437 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 SLC35F1Q5T1Q4 408 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 KLHL36Q8N4N3 616 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 CNEP1R1Q8N9A8 125 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 GNPDA2Q8TDQ7 276 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 CREB3L4Q8TEY5 395 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 OSTF1Q92882 214 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 NAALAD2Q9Y3Q0 740 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ADORA3P0DMS8 318 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 HK1P19367 917 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 XCR1P46094 333 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 GSCP56915 257 aaPredicted RBP10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ERV3-1Q14264 604 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 CYBRD1Q53TN4 286 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 BICRALQ6AI39 1079 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 Q7L0L9 218 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF283Q8N7M2 679 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 HSPBAP1Q96EW2 488 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 SFXN2Q96NB2 322 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF222Q9UK12 451 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ATXN7L1Q9ULK2 861 aaPredicted RBP10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 CACNG3O60359 315 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 C1SP09871 688 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 OR1D5P58170 312 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 TSPAN5P62079 268 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 BBS10Q8TAM1 723 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 FRS2Q8WU20 508 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 FRMD6Q96NE9 622 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 TIMM29Q9BSF4 260 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 HDAC8Q9BY41 377 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 TMEM9BQ9NQ34 198 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 TMEM5Q9Y2B1 443 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 TRIP11Q15643 1979 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 J3QLW9 94 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 DIRAS1O95057 198 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF19P17023 458 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 IQCCQ4KMZ1 466 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 TMEM201Q5SNT2 666 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 GRHL2Q6ISB3 625 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 LINC00471Q8N535 108 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 CPNE2Q96FN4 548 aaPredicted RBP10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 ALPK1Q96QP1 1244 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 EHD1Q9H4M9 534 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 ABCB9Q9NP78 766 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 PCDHGB1Q9Y5G3 927 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 COL5A3P25940 1745 aaPredicted RBP10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 SRRM3A6NNA2 597 aaPredicted RBP10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 FDXRP22570 491 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 CD27P26842 260 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 MXD1Q05195 221 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 PPP1R3AQ16821 1122 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 KBTBD2Q8IY47 623 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 SCML4Q8N228 414 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 MFSD2AQ8NA29 543 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 OR2A12Q8NGT7 310 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 TCTN2Q96GX1 697 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 IL4I1Q96RQ9 567 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 LHX3Q9UBR4 397 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 LDB3O75112 727 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 PEPDP12955 493 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 FOXC1Q12948 553 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 PON3Q15166 354 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 STK11Q15831 433 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 TLDC1Q6P9B6 456 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 OR9I1Q8NGQ6 314 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 SNRNP27Q8WVK2 155 aaKnown RBP10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 OR5B2Q96R09 309 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 MACROD1Q9BQ69 325 aa10.21□□□□□ -0.77
SYNPO2-201ENST00000307142 SSC5DA1L4H1 1573 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 hCG_1807616A0A1W2PRN6 198 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 TRIM64A6NGJ6 449 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 WASH4PA8MWX3 477 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 CREG1O75629 220 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 TAS2R38P59533 333 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 VBP1P61758 197 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 RPS26P62854 115 aaKnown RBP10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 TRAM2Q15035 370 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 TPRG1LQ5T0D9 272 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 ARL9Q6T311 187 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 ZNF572Q7Z3I7 529 aaPredicted RBP10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 ZFAND4Q86XD8 727 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 ALDH16A1Q8IZ83 802 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 OR52P1PQ8NH57 321 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 C16orf78Q8WTQ4 265 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 TLCD1Q96CP7 247 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 HSH2DQ96JZ2 352 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 ZNF395Q9H8N7 513 aaPredicted RBP10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 TNFRSF10DQ9UBN6 386 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 PRKD3O94806 890 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 SOX14O95416 240 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 ANXA8P13928 327 aa10.21□□□□□ -0.78
SYNPO2-201ENST00000307142 TTKP33981 857 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms