RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 TMEM98Q9Y2Y6 226 aa13.48□□□□□ -0.25
RAB40A-201ENST00000304236 SH3GLB1Q9Y371 365 aa13.48□□□□□ -0.25
RAB40A-201ENST00000304236 A3GALT2U3KPV4 340 aa13.48□□□□□ -0.25
RAB40A-201ENST00000304236 EFCAB10A6NFE3 127 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 PLK4O00444 970 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 TOR1BO14657 336 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 PCDH17O14917 1159 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 AIREO43918 545 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 FUCA1P04066 466 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 ALOX5P09917 674 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 ALDH4A1P30038 563 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 BSGP35613 385 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 SLC19A1P41440 591 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 CTSKP43235 329 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 OXA1LQ15070 435 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 INAQ16352 499 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 METRNLQ641Q3 311 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 USP43Q70EL4 1123 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 CCDC103Q8IW40 242 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 TAGAPQ8N103 731 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 ZBTB44Q8NCP5 570 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 RASSF5Q8WWW0 418 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 ALPK1Q96QP1 1244 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 SLIRPQ9GZT3 109 aaKnown RBP13.47□□□□□ -0.25
RAB40A-201ENST00000304236 DCSTAMPQ9H295 470 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 MMP27Q9H306 513 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 TAC3Q9UHF0 121 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 DAPK2Q9UIK4 370 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 SNX8Q9Y5X2 465 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 PMF1-BGLAPU3KQ54 211 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 GPR89AB7ZAQ6 455 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 J3KTA2 159 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 M0R082 166 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 GPR89BP0CG08 455 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 CDH3P22223 829 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 C21orf33P30042 268 aaPredicted RBP13.47□□□□□ -0.25
RAB40A-201ENST00000304236 LIPAP38571 399 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 P2RY2P41231 377 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 GSSP48637 474 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 CD97P48960 835 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 PSMD7P51665 324 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 TRA2BP62995 288 aaKnown RBP13.47□□□□□ -0.25
RAB40A-201ENST00000304236 MESP2Q0VG99 397 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 PDGFRLQ15198 375 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 TOR1AIP1Q5JTV8 583 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 COLEC12Q5KU26 742 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 SLC46A3Q7Z3Q1 461 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 HEATR4Q86WZ0 1026 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 NUDT13Q86X67 352 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 MMAAQ8IVH4 418 aaKnown RBP13.47□□□□□ -0.25
RAB40A-201ENST00000304236 SLC44A2Q8IWA5 706 aaPredicted RBP13.47□□□□□ -0.25
RAB40A-201ENST00000304236 OR9Q2Q8NGE9 314 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 PSMA8Q8TAA3 256 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 ZNF675Q8TD23 568 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 PROX1Q92786 737 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 RGMAQ96B86 450 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 ACAT2Q9BWD1 397 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 SORBS1Q9BX66 1292 aaKnown RBP13.47□□□□□ -0.25
RAB40A-201ENST00000304236 ZNF717Q9BY31 904 aaPredicted RBP13.47□□□□□ -0.25
RAB40A-201ENST00000304236 CNOT2Q9NZN8 540 aaKnown RBP13.47□□□□□ -0.25
RAB40A-201ENST00000304236 ACSL5Q9ULC5 683 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 TMCC3Q9ULS5 477 aa13.47□□□□□ -0.25
RAB40A-201ENST00000304236 TMEM247A6NEH6 219 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 ZAR1LA6NP61 321 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 KMOO15229 486 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.25
RAB40A-201ENST00000304236 OXSR1O95747 527 aaPredicted RBP13.46□□□□□ -0.25
RAB40A-201ENST00000304236 ADAP00813 363 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 RPLP0P05388 317 aaKnown RBP13.46□□□□□ -0.25
RAB40A-201ENST00000304236 BMP4P12644 408 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 FRKP42685 505 aaPredicted RBP13.46□□□□□ -0.25
RAB40A-201ENST00000304236 ALDH9A1P49189 494 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 CRISP1P54107 249 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 CDK3Q00526 305 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 IRF3Q14653 427 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 SYT16Q17RD7 645 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 TUBA3EQ6PEY2 450 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 TSSK4Q6SA08 328 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 ZNF367Q7RTV3 350 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 ADGRF3Q8IZF5 1079 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 AQP11Q8NBQ7 271 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 PLA2G15Q8NCC3 412 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 KBTBD8Q8NFY9 601 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 MCFD2Q8NI22 146 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 ZBED6CLQ96FA7 236 aaPredicted RBP13.46□□□□□ -0.25
RAB40A-201ENST00000304236 DACH2Q96NX9 599 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 F2RL3Q96RI0 385 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 BTBD2Q9BX70 525 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 ACSS1Q9NUB1 689 aaPredicted RBP13.46□□□□□ -0.25
RAB40A-201ENST00000304236 CLN6Q9NWW5 311 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 IRAK4Q9NWZ3 460 aa13.46□□□□□ -0.25
RAB40A-201ENST00000304236 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.46□□□□□ -0.25
RAB40A-201ENST00000304236 SH3BP5O60239 455 aa13.45□□□□□ -0.26
RAB40A-201ENST00000304236 TBX6O95947 436 aaPredicted RBP13.45□□□□□ -0.26
RAB40A-201ENST00000304236 PORP16435 677 aaPredicted RBP13.45□□□□□ -0.26
RAB40A-201ENST00000304236 CD40LGP29965 261 aa13.45□□□□□ -0.26
RAB40A-201ENST00000304236 MAGEA8P43361 318 aa13.45□□□□□ -0.26
RAB40A-201ENST00000304236 PCBP4P57723 403 aaKnown RBP13.45□□□□□ -0.26
RAB40A-201ENST00000304236 SMIM11AP58511 58 aa13.45□□□□□ -0.26
RAB40A-201ENST00000304236 RELAQ04206 551 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms