RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 GFYI3L273 518 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 CBX4O00257 560 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 PRAMEF4O60810 478 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 STOMP27105 288 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 POU1F1P28069 291 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 CCND3P30281 292 aaPredicted RBP13.18□□□□□ -0.3
KARS-201ENST00000302445 RAE1P78406 368 aaKnown RBP13.18□□□□□ -0.3
KARS-201ENST00000302445 POU6F2P78424 691 aaPredicted RBP13.18□□□□□ -0.3
KARS-201ENST00000302445 IRF8Q02556 426 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 HSF2Q03933 536 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 COX10Q12887 443 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 SEC23BQ15437 767 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 PRAMEF9Q5VWM5 478 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 GRHL2Q6ISB3 625 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 TMEM65Q6PI78 240 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 GPAT4Q86UL3 456 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ADGRF3Q8IZF5 1079 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 LINC00471Q8N535 108 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ZNF366Q8N895 744 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 HUS1BQ8NHY5 278 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 APOBEC4Q8WW27 367 aaKnown RBP13.18□□□□□ -0.3
KARS-201ENST00000302445 MTERF3Q96E29 417 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 SCMH1Q96GD3 660 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ATF6BQ99941 703 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 SLC35A5Q9BS91 424 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 PPIL3Q9H2H8 161 aaKnown RBP13.18□□□□□ -0.3
KARS-201ENST00000302445 HEXA-AS1Q9H8Q6 139 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ZFP64Q9NPA5 681 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ZDHHC3Q9NYG2 299 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 NUP214P35658 2090 aaPredicted RBP13.17□□□□□ -0.3
KARS-201ENST00000302445 TRAV19A0A0A6YYK7 116 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 SH3BP5O60239 455 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 SNAPC5O75971 98 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 CD160O95971 181 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 ANXA4P09525 319 aaPredicted RBP13.17□□□□□ -0.3
KARS-201ENST00000302445 RRASP10301 218 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 BPIP17213 487 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 SSTR4P31391 388 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 TIA1P31483 386 aaKnown RBP eCLIP13.17□□□□□ -0.3
KARS-201ENST00000302445 BDKRB1P46663 353 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 EPHA4P54764 986 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 AANATQ16613 207 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 PLA1AQ53H76 456 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 ATAT1Q5SQI0 421 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 UNC5DQ6UXZ4 953 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 PRSS42Q7Z5A4 293 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 LUZP2Q86TE4 346 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 OR8H3Q8N146 312 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 UBE2J2Q8N2K1 259 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 CCDC120Q96HB5 630 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 OR2M2Q96R28 347 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 ABCG8Q9H221 673 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 CLEC4MQ9H2X3 399 aaPredicted RBP13.17□□□□□ -0.3
KARS-201ENST00000302445 REEP4Q9H6H4 257 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 SLC22A14Q9Y267 594 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.17□□□□□ -0.3
KARS-201ENST00000302445 ISM1B1AKI9 464 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
KARS-201ENST00000302445 CASKO14936 926 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 KPNA5O15131 536 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 PLOD3O60568 738 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 SOD1P00441 154 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 GRK4P32298 578 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 MAPK8P45983 427 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 RAG2P55895 527 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 ZXDBP98169 803 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 ACSM1Q08AH1 577 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 PDE7AQ13946 482 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 P2RY14Q15391 338 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 CRTC2Q53ET0 693 aaPredicted RBP13.17□□□□□ -0.3
KARS-201ENST00000302445 COX20Q5RI15 118 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 PLEKHS1Q5SXH7 462 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 DCST1Q5T197 706 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 CEACAM20Q6UY09 585 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 COMMD7Q86VX2 200 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 RASGRP3Q8IV61 690 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 TM9SF4Q92544 642 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 C1GALT1C1Q96EU7 318 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 ZSCAN5AQ9BUG6 496 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 LYARQ9NX58 379 aaKnown RBP13.17□□□□□ -0.3
KARS-201ENST00000302445 COMMD3Q9UBI1 195 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 UBQLN2Q9UHD9 624 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 MGAT4AQ9UM21 535 aa13.17□□□□□ -0.3
KARS-201ENST00000302445 IGLV3-16A0A075B6K0 115 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 LOC102723532A0A0G2JNH3 316 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 SYN3O14994 580 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 HPGDSO60760 199 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 SERPINI2O75830 405 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 RECKO95980 971 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 ACP2P11117 423 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 ELAVL4P26378 380 aaKnown RBP13.16□□□□□ -0.3
KARS-201ENST00000302445 ETV5P41161 510 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 DGKGP49619 791 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 ETV1P50549 477 aa13.16□□□□□ -0.3
KARS-201ENST00000302445 ACLYP53396 1101 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms