RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 HEPACAM2A8MVW5 462 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 FABP5Q01469 135 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.18
COL6A2-201ENST00000300527 MTFR2Q6P444 385 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 GRAMD2AQ8IUY3 354 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 OR52I1Q8NGK6 324 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 WDFY2Q96P53 400 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 C1QTNF6Q9BXI9 259 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 ZC4H2Q9NQZ6 224 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 ZDHHC3Q9NYG2 299 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 ENOPH1Q9UHY7 261 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 NCKAP1Q9Y2A7 1128 aa13.96□□□□□ -0.18
COL6A2-201ENST00000300527 TMEM202A6NGA9 273 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 TEX46H3BTG2 121 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 FFAR1O14842 300 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 NUPL2O15504 423 aaKnown RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF623O75123 536 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 IL1AP01583 271 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ENPP1P22413 925 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ASMTP46597 345 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF81P51508 661 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 RAE1P78406 368 aaKnown RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 MLLT11Q13015 90 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 MAP2K5Q13163 448 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ADGRF1Q5T601 910 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 BRAT1Q6PJG6 821 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 CREB3L2Q70SY1 520 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 CHMP1BQ7LBR1 199 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ASB11Q8WXH4 323 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 NIPAL2Q9H841 368 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 IL20RAQ9UHF4 553 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ING4Q9UNL4 249 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 A0A1W2PRB8 838 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 PAHP00439 452 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 RHCEP18577 417 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 STK19P49842 368 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 SMAD3P84022 425 aaKnown RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 HSPB3Q12988 150 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF791Q3KP31 576 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 CLLU1OSQ5K130 101 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 KIAA1161Q6NSJ0 714 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 AGTRAPQ6RW13 159 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 LSMEM1Q8N8F7 131 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 PROKR2Q8NFJ6 384 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 OR7G3Q8NG95 312 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 OR52N2Q8NGI0 321 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 CLP1Q92989 425 aaKnown RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 NACC2Q96BF6 587 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 DCLRE1CQ96SD1 692 aaKnown RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 WRAP53Q9BUR4 548 aaKnown RBP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 CHST8Q9H2A9 424 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 EXTL2Q9UBQ6 330 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 HCN2Q9UL51 889 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 LAMA3Q16787 3333 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 M0R3H8 397 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 ADAM12O43184 909 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 SEPT4O43236 478 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 CA12O43570 354 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 C8GP07360 202 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 PUM1Q14671 1186 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 GDPGP1Q6ZNW5 385 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 COMMD7Q86VX2 200 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A2-201ENST00000300527 OR4M2Q8NGB6 313 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 UFD1Q92890 307 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 WFDC6Q9BQY6 131 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 PRR14Q9BWN1 585 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 BTNL2Q9UIR0 455 aa13.95□□□□□ -0.18
COL6A2-201ENST00000300527 PRMT3O60678 531 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 RAB36O95755 333 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 H1F0P07305 194 aaKnown RBP13.94□□□□□ -0.18
COL6A2-201ENST00000300527 DDCP20711 480 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 TIA1P31483 386 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL6A2-201ENST00000300527 SLC6A12P48065 614 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 DCDC1P59894 354 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 DSTNP60981 165 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 CRTC1Q6UUV9 634 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 GALNT11Q8NCW6 608 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 OR8J1Q8NGP2 316 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 ZDHHC6Q9H6R6 413 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 MVB12BQ9H7P6 319 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 PAK6Q9NQU5 681 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-201ENST00000300527 NUDT15Q9NV35 164 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 TRPC4Q9UBN4 977 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 HRO43593 1189 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 SLC22A5O76082 557 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 ABATP80404 500 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 RTP2Q5QGT7 225 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 ACSM5Q6NUN0 579 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF730Q6ZMV8 503 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 C11orf96Q7Z7L8 435 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 IQCHQ86VS3 1027 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 NEIL3Q8TAT5 605 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 RNFT2Q96EX2 444 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 TBX5Q99593 518 aa13.94□□□□□ -0.18
COL6A2-201ENST00000300527 REEP4Q9H6H4 257 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms