RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ERCC1P07992 297 aaPredicted RBP14.27□□□□□ -0.12
SCN3B-201ENST00000299333 SLC2A5P22732 501 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 HSD17B2P37059 387 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 GRB7Q14451 532 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 CPA6Q8N4T0 437 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 SCAMP5Q8TAC9 235 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 DOHHQ9BU89 302 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 SDHAF3Q9NRP4 125 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 CLEC4EQ9ULY5 219 aa14.27□□□□□ -0.12
SCN3B-201ENST00000299333 A0A0U1RQK1 487 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 FAAHO00519 579 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 MAS1P04201 325 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 CSKP41240 450 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 CRISP1P54107 249 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 WDR53Q7Z5U6 358 aaPredicted RBP14.27□□□□□ -0.13
SCN3B-201ENST00000299333 TSPEARQ8WU66 669 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 THAP4Q8WY91 577 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 PRR11Q96HE9 360 aaPredicted RBP14.27□□□□□ -0.13
SCN3B-201ENST00000299333 DMAC2Q9NW81 257 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 A0A1W2PPL8 197 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 BCAS1O75363 584 aaPredicted RBP14.27□□□□□ -0.13
SCN3B-201ENST00000299333 GRPRP30550 384 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 RFC2P35250 354 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 KIAA1191Q96A73 305 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 PLD4Q96BZ4 506 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 NELFAQ9H3P2 528 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 DLGAP4Q9Y2H0 992 aa14.27□□□□□ -0.13
SCN3B-201ENST00000299333 DNMT3AQ9Y6K1 912 aaPredicted RBP14.27□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF850A8MQ14 1090 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 BHLHE40O14503 412 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 SDHDO14521 159 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 CDK1P06493 297 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 ACP5P13686 325 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 IGFBP4P22692 258 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 DNAJB13P59910 316 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 DBPQ10586 325 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 TBC1D25Q3MII6 688 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 C6orf136Q5SQH8 315 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 MAP1SQ66K74 1059 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 FIP1L1Q6UN15 594 aaKnown RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 SMIM15Q7Z3B0 74 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 BEST4Q8NFU0 473 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 OR6N1Q8NGY5 312 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 PPTC7Q8NI37 304 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 TMEM121BQ9BXQ6 578 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 Q9N2J8 555 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 NIT2Q9NQR4 276 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 AMY2AP04746 511 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 DNAJB1P25685 340 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 PGM2L1Q6PCE3 622 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 GDPD1Q8N9F7 314 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 PLA2G15Q8NCC3 412 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 OR56B2PQ8NGI1 322 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 WDR20Q8TBZ3 569 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 LRR1Q96L50 414 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 SNX27Q96L92 541 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 BRF2Q9HAW0 419 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 CD3GP09693 182 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 RNF144AP50876 292 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 NR0B1P51843 470 aaKnown RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 SEC13P55735 322 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 MMAAQ8IVH4 418 aaKnown RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 NUS1Q96E22 293 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 MOCOSQ96EN8 888 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 HAPLN3Q96S86 360 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF416Q9BWM5 594 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 MTFR1LQ9H019 292 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 KCNH6Q9H252 994 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 CNOT11Q9UKZ1 510 aaKnown RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 TMEM131LA2VDJ0 1609 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 MANSC4A6NHS7 340 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 F5H5P2 479 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 SOX1O00570 391 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 TLL1O43897 1013 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 COQ9O75208 318 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 HNRNPFP52597 415 aaKnown RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 ART1P52961 327 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 SLC22A10Q63ZE4 541 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 VITQ6UXI7 678 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 OR8J1Q8NGP2 316 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 OR5M3Q8NGP4 307 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 SLC22A17Q8WUG5 538 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 DCUN1D4Q92564 292 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 ZBTB20Q9HC78 741 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 A6NHS1 94 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 J3KR12 359 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 TREHO43280 583 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 UCHL1P09936 223 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 RAB8AP61006 207 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 HMGN2P46Q86SG4 172 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 CLDN19Q8N6F1 224 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 WDR77Q9BQA1 342 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-201ENST00000299333 CCM2Q9BSQ5 444 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 SAMD10Q9BYL1 202 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 CD244Q9BZW8 370 aa14.26□□□□□ -0.13
SCN3B-201ENST00000299333 COL1A2P08123 1366 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 GLOD5A6NK44 160 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 CAPNS1P04632 268 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 ATP1B2P14415 290 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms