RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 STX2P32856 288 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 PIK3CBP42338 1070 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 HNRNPH2P55795 449 aaKnown RBP18.1■□□□□ 0.49
CXCL3-201ENST00000296026 CAV1Q03135 178 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 SLC22A10Q63ZE4 541 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 B3GNT6Q6ZMB0 384 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 ZCCHC7Q8N3Z6 543 aaKnown RBP18.1■□□□□ 0.49
CXCL3-201ENST00000296026 FBXO25Q8TCJ0 367 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 DOK4Q8TEW6 326 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 KCTD4Q8WVF5 259 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 FBXL20Q96IG2 436 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 ART5Q96L15 291 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 DMRT3Q9NQL9 472 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 FAM215AQ9Y5M1 114 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.1■□□□□ 0.49
CXCL3-201ENST00000296026 DNAJC13O75165 2243 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 SYCE1LA8MT33 242 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 NADKO95544 446 aaPredicted RBP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 HOXD4P09016 255 aaPredicted RBP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 GLI4P10075 376 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 ALOX15P16050 662 aaPredicted RBP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 BUD31P41223 144 aaPredicted RBP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 RIPPLY3P57055 190 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 RPS13P62277 151 aaKnown RBP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 IRF9Q00978 393 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 NAB1Q13506 487 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 LIPJQ5W064 366 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 RTL6Q6ICC9 239 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 ADGRD1Q6QNK2 874 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 LYPD8Q6UX82 237 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 ST13P4Q8IZP2 240 aaPredicted RBP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 CENPLQ8N0S6 344 aaPredicted RBP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 SLC15A4Q8N697 577 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 PAQR8Q8TEZ7 354 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 SARAFQ96BY9 339 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 SPACA9Q96E40 222 aaPredicted RBP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 CNPPD1Q9BV87 410 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 EXO5Q9H790 373 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 ACTR8Q9H981 624 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 SH2D2AQ9NP31 389 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.09■□□□□ 0.49
CXCL3-201ENST00000296026 TSC22D4Q9Y3Q8 395 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 PCDHGA11Q9Y5H2 935 aa18.09■□□□□ 0.49
CXCL3-201ENST00000296026 TRGV5A0A0B4J1U4 118 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 PROM1O43490 865 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 ZFP36L2P47974 494 aaKnown RBP18.08■□□□□ 0.48
CXCL3-201ENST00000296026 ARFIP1P53367 373 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 HERVK_113P63132 956 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 ERVK-8P63133 956 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 KCNJ2P63252 427 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 SETDB1Q15047 1291 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 TRADDQ15628 312 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 PFKFB4Q16877 469 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 WLSQ5T9L3 541 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 PRAMEF20Q5VT98 475 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 ZDHHC24Q6UX98 284 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 RHEBL1Q8TAI7 183 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 GAL3ST4Q96RP7 486 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 ZNF559Q9BR84 538 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 ERVK-6Q9BXR3 956 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 RAB17Q9H0T7 212 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 ERVK-19Q9WJR5 959 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 CCDC168Q8NDH2 2452 aa18.08■□□□□ 0.48
CXCL3-201ENST00000296026 A0A087X1B8 175 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 A0A0G2JNJ9 132 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 IQANK1A0A1B0GTG1 560 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 LRRC14BA6NHZ5 514 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 WASHC1A8K0Z3 465 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 KLK8O60259 260 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 OR10H2O60403 315 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 HCN1O60741 890 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 WDR1O75083 606 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 EEDO75530 441 aaKnown RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 GPR75O95800 540 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 C2P06681 752 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 RFPL3SP0C7P2 107 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 GFAPP14136 432 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 PTX3P26022 381 aaPredicted RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 PHEXP78562 749 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 TBL3Q12788 808 aaKnown RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 ZNF267Q14586 743 aaPredicted RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 FAM83EQ2M2I3 478 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 SPRED3Q2MJR0 410 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 SPNS3Q6ZMD2 512 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 RNF111Q6ZNA4 994 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 SLC29A4Q7RTT9 530 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 CLYBLQ8N0X4 340 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 FAM13CQ8NE31 585 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 MRRFQ96E11 262 aaKnown RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 PELOQ9BRX2 385 aaKnown RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 ZNF717Q9BY31 904 aaPredicted RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 ZNF703Q9H7S9 590 aaPredicted RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 LYARQ9NX58 379 aaKnown RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 ALKBH4Q9NXW9 302 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 SPRR3Q9UBC9 169 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 Q9UFV3 132 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 KCNN3Q9UGI6 736 aa18.07■□□□□ 0.48
CXCL3-201ENST00000296026 BOKQ9UMX3 212 aaPredicted RBP18.07■□□□□ 0.48
CXCL3-201ENST00000296026 INTS1Q8N201 2190 aaKnown RBP18.06■□□□□ 0.48
CXCL3-201ENST00000296026 A0A1W2PR48 441 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms