RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MANFP55145 182 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 RFTN2Q52LD8 501 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 DDI2Q5TDH0 399 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 IL23RQ5VWK5 629 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 LRRC69Q6ZNQ3 347 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 TMPRSS9Q7Z410 1059 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 P4HA3Q7Z4N8 544 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF501Q96CX3 271 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 RBCK1Q9BYM8 510 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PRDM7Q9NQW5 492 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 FBXO8Q9NRD0 319 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 MS4A12Q9NXJ0 267 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 EHD3Q9NZN3 535 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 TMEM9Q9P0T7 183 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 TAGLN3Q9UI15 199 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM220BPB1ANY3 271 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 SCAMP2O15127 329 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC22A3O75751 556 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 NSA2O95478 260 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 TGFB1P01137 390 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 NPPAP01160 153 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 IL6P05231 212 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 HIST1H1TP22492 207 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 TPP2P29144 1249 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC7A1P30825 629 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 RUNX1T1Q06455 604 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 KLF10Q13118 480 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 LACTB2Q53H82 288 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 HACD2Q6Y1H2 254 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 KRT73Q86Y46 540 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 TMEM132CQ8N3T6 1108 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 FITM2Q8N6M3 262 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 PROKR1Q8TCW9 393 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM117AQ9C073 453 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM60AQ9NP50 221 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 KLHL1Q9NR64 748 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 PACSIN3Q9UKS6 424 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 KLHL20Q9Y2M5 609 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 SNX13Q9Y5W8 968 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 CLCA3PQ9Y6N3 262 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 RALGAPA1Q6GYQ0 2036 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 LOC105369274A0A096LPK9 316 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 LOC102723532A0A0G2JNH3 316 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 B3GALT2O43825 422 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 HOXB3P14651 431 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 ALOX12P18054 663 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 ATP5A1P25705 553 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 PIK3R1P27986 724 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 AVPR1BP47901 424 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 RAB15P59190 212 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 RCAN2Q14206 197 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 WASHC2DQ5SRD0 308 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM71E1Q6IPT2 247 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 OR4N4Q8N0Y3 316 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM110BQ8TC76 370 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 MARK4Q96L34 752 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 F2RL3Q96RI0 385 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC25A23Q9BV35 468 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 BHLHE41Q9C0J9 482 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 OR51B5Q9H339 312 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 PNO1Q9NRX1 252 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 SERTAD3Q9UJW9 196 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 NRP2O60462 931 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 GALR3O60755 368 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 ANXA4P09525 319 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 G6PDP11413 515 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 MYF5P13349 255 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 CALB2P22676 271 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 ZFP36L2P47974 494 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 VSX2P58304 361 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 MC2RQ01718 297 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 BLOC1S3Q6QNY0 202 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 CYP2R1Q6VVX0 501 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 PNPT1Q8TCS8 783 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 C16orf78Q8WTQ4 265 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 C10orf90Q96M02 699 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 PPM1MQ96MI6 270 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 MYCBPQ99417 103 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 DPH2Q9BQC3 489 aaPredicted RBP7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 RAD21L1Q9H4I0 556 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 SYNPO2LQ9H987 977 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 TOR4AQ9NXH8 423 aa7.97□□□□□ -1.13
PTPDC1-201ENST00000288976 DSCR3O14972 297 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 ERI3O43414 337 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 CDC40O60508 579 aaKnown RBP eCLIP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 EEDO75530 441 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 KLHL18O94889 574 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 IFNA14P01570 189 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF888P0CJ79 500 aaPredicted RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 ME2P23368 584 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 INSM1Q01101 510 aaPredicted RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 KLC1Q07866 573 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 UBAP2LQ14157 1087 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 TRIP6Q15654 476 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM214AQ32MH5 1076 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 CCNYL2Q5T2Q4 361 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 PRMT9Q6P2P2 845 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 TTLL10Q6ZVT0 673 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 AGBL5Q8NDL9 886 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 OR8J2Q8NGG1 315 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms