RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ZNF451Q9Y4E5 1061 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 GOLGA4Q13439 2230 aaKnown RBP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 A0A075B6Q4 140 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3DA0A087WVF3 549 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3IA0A087WXS9 549 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3EA0A087X179 549 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3KA0A087X1G2 549 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3FA6NER0 549 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TMEM229AB2RXF0 380 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3LB9A6J9 549 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3HP0C7X1 549 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 PSMB5P28074 263 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 MAPK9P45984 424 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 PPP2CBP62714 309 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 SELENOWP63302 87 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 PPP2CAP67775 309 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3GQ6DHY5 549 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3CQ6IPX1 549 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 MED27Q6P2C8 311 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 NANOGNBQ7Z5D8 188 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TSEN54Q7Z6J9 526 aaKnown RBP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 UBQLNLQ8IYU4 475 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TBC1D3Q8IZP1 549 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 CYP4Z2PQ8N1L4 340 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 OR4C15Q8NGM1 316 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TMCO6Q96DC7 493 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 C11orf24Q96F05 449 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 MSLNLQ96KJ4 702 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 SDHCQ99643 169 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 DUSP26Q9BV47 211 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 CDCA4Q9BXL8 241 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TMEM184CQ9NVA4 438 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 RUVBL1Q9Y265 456 aaKnown RBP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 C1orf226A1L170 272 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 PIPSLA2A3N6 862 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 KIAA0513O60268 411 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 DNTTP04053 509 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 NUDT7P0C024 238 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 TRIM23P36406 574 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 HTR3AP46098 478 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 SGCGQ13326 291 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 METRNLQ641Q3 311 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 SPATC1Q76KD6 591 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 C11orf65Q8NCR3 313 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 SPPL2AQ8TCT8 520 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 CEP19Q96LK0 163 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 SLC30A2Q9BRI3 323 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 IMPAD1Q9NX62 359 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 CA5BQ9Y2D0 317 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 C1GALT1C1LP0DN25 315 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 LAMP1P11279 417 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 IGFALSP35858 605 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 ADPRHP54922 357 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 RGNQ15493 299 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 SLC5A11Q8WWX8 675 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 SLC17A9Q9BYT1 436 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 C3orf14Q9HBI5 128 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 ITM2CQ9NQX7 267 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 MAPRE3Q9UPY8 281 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 N6AMT1Q9Y5N5 214 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 PIAS3Q9Y6X2 628 aa17.4■□□□□ 0.38
PDLIM3-201ENST00000284767 PRAMEF33A0A0G2JMD5 474 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 EFCAB10A6NFE3 127 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 CENPBD1B2RD01 187 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 SCAMP2O15127 329 aaKnown RBP17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 RNGTTO60942 597 aaKnown RBP17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 HSMCR30P0CW71 290 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 TFF2Q03403 129 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 CLPPQ16740 277 aaPredicted RBP17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 MICAQ29983 383 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 MTSS1LQ765P7 747 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 TDHQ8IZJ6 230 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 VPS37AQ8NEZ2 397 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 RAD51AP1Q96B01 352 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 SH3KBP1Q96B97 665 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 METTL2AQ96IZ6 378 aaKnown RBP17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 C1QTNF2Q9BXJ5 285 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 CNOT2Q9NZN8 540 aaKnown RBP17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 TAC3Q9UHF0 121 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 DUSP12Q9UNI6 340 aa17.39■□□□□ 0.38
PDLIM3-201ENST00000284767 SH3D21A4FU49 640 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 CAPN5O15484 640 aaPredicted RBP17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 PLRG1O43660 514 aaKnown RBP17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 ANXA4P09525 319 aaPredicted RBP17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 CD72P21854 359 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 RPS21P63220 83 aaKnown RBP17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 PRAMEF14Q5SWL7 426 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 ATAD3CQ5T2N8 411 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 PRAMEF13Q5VWM6 474 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 UNC5DQ6UXZ4 953 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 SMRP1Q8NCR6 262 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 B3GNT7Q8NFL0 401 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 GABRG3Q99928 467 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 NDEL1Q9GZM8 345 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 CUEDC1Q9NWM3 386 aaPredicted RBP17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 MS4A12Q9NXJ0 267 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 ENOPH1Q9UHY7 261 aa17.39■□□□□ 0.37
PDLIM3-201ENST00000284767 ANKRD34BA5PLL1 514 aa17.38■□□□□ 0.37
PDLIM3-201ENST00000284767 CCRL2O00421 344 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms