RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TSPAN6O43657 245 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 F2P00734 622 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 TYRP14679 529 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 ATP5A1P25705 553 aaKnown RBP15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 VAMP2P63027 116 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 OR51A7Q8NH64 312 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 PHOSPHO1Q8TCT1 267 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 PTERQ96BW5 349 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 HIST1H2AAQ96QV6 131 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 RANBP9Q96S59 729 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 HAPLN2Q9GZV7 340 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 SLC28A3Q9HAS3 691 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 TIA1P31483 386 aaKnown RBP eCLIP15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 HK3P52790 923 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 SELPLGQ14242 412 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 SPCS2Q15005 226 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 GTDC1Q4AE62 458 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 ATAD3CQ5T2N8 411 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 CES4AQ5XG92 561 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 PSD4Q8NDX1 1056 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 LRR1Q96L50 414 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 HDHD5Q9BXW7 423 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 IL37Q9NZH6 218 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 INTS6Q9UL03 887 aaKnown RBP15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 ADH5P11766 374 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 FAM198BQ6UWH4 519 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 NRSN1Q8IZ57 195 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 FTMTQ8N4E7 242 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 PEX13Q92968 403 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 DPYSL5Q9BPU6 564 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 P2RY13Q9BPV8 354 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 SCDO00767 359 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 HLA-EP13747 358 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 ETV3P41162 512 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 GRSF1Q12849 480 aaKnown RBP eCLIP15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 KCNC3Q14003 757 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 CLECL1Q8IZS7 167 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 ADAMTS16Q8TE57 1224 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 NSMAFQ92636 917 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 GON4LQ3T8J9 2241 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 FER1L4A9Z1Z3 1794 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 ZNF726A6NNF4 738 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 TNFRSF10BO14763 440 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 LCKP06239 509 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 CHMP24386 653 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 NDUFS1P28331 727 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 PDGFRLQ15198 375 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 ZNF789Q5FWF6 425 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 MSANTD1Q6ZTZ1 278 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 NAXEQ8NCW5 288 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 PAPD5Q8NDF8 572 aaKnown RBP15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 GAL3ST3Q96A11 431 aa15.77■□□□□ 0.12
SH3RF1-201ENST00000284637 FAM208AQ9UK61 1670 aaKnown RBP15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 ALX3O95076 343 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 PAHP00439 452 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 PYCR1P32322 319 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 NRIP1P48552 1158 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 NLGN2Q8NFZ4 835 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 FCAMRQ8WWV6 532 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 ACOT12Q8WYK0 555 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 SORT1Q99523 831 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 CTRCQ99895 268 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 MMP28Q9H239 520 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 MTG2Q9H4K7 406 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 LAMP5Q9UJQ1 280 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 C7orf72A4D263 438 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 INHAP05111 366 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 ACVR1BP36896 505 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 PAGE3Q5JUK9 113 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 AGPAT4Q9NRZ5 378 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 NPAP1Q9NZP6 1156 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 SCP2D1Q9UJQ7 156 aa15.77■□□□□ 0.11
SH3RF1-201ENST00000284637 TEX13DA0A0J9YY54 714 aaPredicted RBP15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 CAPN15O75808 1086 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 H2AFB2P0C5Z0 115 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 SMIM18P0DKX4 95 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 CPOXP36551 454 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 STK19P49842 368 aaPredicted RBP15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 NTRK2Q16620 822 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 PYHIN1Q6K0P9 492 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 TMPRSS9Q7Z410 1059 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 KLBQ86Z14 1044 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 CCDC54Q8NEL0 328 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 MAL2Q969L2 176 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 NELL2Q99435 816 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 TDP1Q9NUW8 608 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 TCRBV3S1A0A5B6 114 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 PCDH17O14917 1159 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 COCHO43405 550 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 B4GAT1O43505 415 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 MAPK3P27361 379 aaPredicted RBP15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 NAA10P41227 235 aaPredicted RBP15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 CLDN8P56748 225 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 CDK5R2Q13319 367 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 DOC2AQ14183 400 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 OR2T33Q8NG76 320 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 TXNDC15Q96J42 360 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 ALKBH4Q9NXW9 302 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 GRHPRQ9UBQ7 328 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 KCPQ6ZWJ8 1503 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms