RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SLC16A5O15375 505 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 PROM1O43490 865 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 GUCA1CO95843 209 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 DNTTP04053 509 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 GAAP10253 952 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 HSD3B1P14060 373 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CBLP22681 906 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 HSD3B2P26439 372 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 ST8SIA6P61647 398 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 LPAL2Q16609 132 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 IFI44LQ53G44 452 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 SMUG1Q53HV7 270 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 SOWAHCQ53LP3 525 aaPredicted RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 ANKRD46Q86W74 232 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 GATAD2AQ86YP4 633 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CBARPQ8N350 705 aaPredicted RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 C11orf65Q8NCR3 313 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 GOT1L1Q8NHS2 421 aaPredicted RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 RLN3Q8WXF3 142 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CXorf40BQ96DE9 158 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 TSSK3Q96PN8 268 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 MKRN2Q9H000 416 aaKnown RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 ELOVL6Q9H5J4 265 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 RUBCNLQ9H714 662 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 TPT1P8Q9HAU6 139 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 PRSS16Q9NQE7 514 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 RPRD1BQ9NQG5 326 aaKnown RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 ITM2CQ9NQX7 267 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 IMPAD1Q9NX62 359 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 MS4A12Q9NXJ0 267 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 STMN3Q9NZ72 180 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 RUVBL1Q9Y265 456 aaKnown RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 RIF1Q5UIP0 2472 aaKnown RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 DSPPQ9NZW4 1301 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 PLXND1Q9Y4D7 1925 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 HYKKA2RU49 373 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 AGAP14A8MT82 685 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 B4DXG7 233 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 ERVH48-1M5A8F1 160 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 AP3D1O14617 1153 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SHOXO15266 292 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 CCNB2O95067 398 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SLC25A14O95258 325 aaPredicted RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 C1QBP02746 253 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 ITGB6P18564 788 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 ITGALP20701 1170 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 BCKDHBP21953 392 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 ACRV1P26436 265 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 P2RY2P41231 377 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 GDF5P43026 501 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 CRYBB2P43320 205 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 ASMTP46597 345 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 GZMKP49863 264 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 HNRNPA1L2Q32P51 320 aaKnown RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SGO1Q5FBB7 561 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SNAP47Q5SQN1 464 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 KIAA1324Q6UXG2 1013 aaKnown RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 CREB3L2Q70SY1 520 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 KLHDC8AQ8IYD2 350 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 FAM160A2Q8N612 972 aaPredicted RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 FRMD1Q8N878 549 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 DCAF4L2Q8NA75 395 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 LKAAEAR1Q8TD35 194 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 C11orf24Q96F05 449 aaPredicted RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 FRMD6Q96NE9 622 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 DHRS9Q9BPW9 319 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 GTPBP2Q9BX10 602 aaKnown RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 BARHL1Q9BZE3 327 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 RNF121Q9H920 327 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 CD93Q9NPY3 652 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 NDUFB11Q9NX14 153 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 A0A1W2PQ09 198 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 ARHGEF9O43307 516 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SMAD6O43541 496 aaKnown RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 GFRA3O60609 400 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 HCN1O60741 890 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 TMCC2O75069 709 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF780AO75290 641 aaPredicted RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 GCM2O75603 506 aaPredicted RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 PDE9AO76083 593 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 C8GP07360 202 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 MPC1LP0DKB6 136 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 MYL9P24844 172 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 RPS19P39019 145 aaKnown RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 RUNX1T1Q06455 604 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SP140Q13342 867 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 LARS2Q15031 903 aaKnown RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 RGNQ15493 299 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 BAK1Q16611 211 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 Q5BKY6 102 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 METAP1DQ6UB28 335 aaPredicted RBP9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SLC30A8Q8IWU4 369 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 LGI4Q8N135 537 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 COQ8BQ96D53 544 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 APIPQ96GX9 242 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 OR5M11Q96RB7 305 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 SLC12A9Q9BXP2 914 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF556Q9HAH1 456 aa9.82□□□□□ -0.84
UPF3B-201ENST00000276201 MRPL39Q9NYK5 338 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms