RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SGCZQ96LD1 299 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 CENPKQ9BS16 269 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 ZNF717Q9BY31 904 aaPredicted RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 ACSS3Q9H6R3 686 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 RPF2Q9H7B2 306 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 IPPKQ9H8X2 491 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 ACTR8Q9H981 624 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 DMRT3Q9NQL9 472 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 PSD3Q9NYI0 1048 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 ATG4BQ9Y4P1 393 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 ANGPTL3Q9Y5C1 460 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 TNPO3Q9Y5L0 923 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 CSMD1Q96PZ7 3565 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 A6NHS1 94 aa9□□□□□ -0.97
VPS41-201ENST00000265745 C19orf84I3L1E1 186 aa9□□□□□ -0.97
VPS41-201ENST00000265745 FOXE1O00358 373 aaPredicted RBP9□□□□□ -0.97
VPS41-201ENST00000265745 PROM1O43490 865 aa9□□□□□ -0.97
VPS41-201ENST00000265745 CDC40O60508 579 aaKnown RBP eCLIP9□□□□□ -0.97
VPS41-201ENST00000265745 GLSO94925 669 aaPredicted RBP9□□□□□ -0.97
VPS41-201ENST00000265745 SIX3O95343 332 aaPredicted RBP9□□□□□ -0.97
VPS41-201ENST00000265745 TPOP07202 933 aa9□□□□□ -0.97
VPS41-201ENST00000265745 SNRPB2P08579 225 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 COX7A2P14406 83 aa9□□□□□ -0.97
VPS41-201ENST00000265745 COX6B1P14854 86 aa9□□□□□ -0.97
VPS41-201ENST00000265745 CNR1P21554 472 aa9□□□□□ -0.97
VPS41-201ENST00000265745 TLX1P31314 330 aaPredicted RBP9□□□□□ -0.97
VPS41-201ENST00000265745 PHBP35232 272 aa9□□□□□ -0.97
VPS41-201ENST00000265745 KIR3DL1P43629 444 aa9□□□□□ -0.97
VPS41-201ENST00000265745 RAP1GDS1P52306 607 aa9□□□□□ -0.97
VPS41-201ENST00000265745 HNRNPH2P55795 449 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 RPS13P62277 151 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 PPIAP62937 165 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 FOLH1Q04609 750 aa9□□□□□ -0.97
VPS41-201ENST00000265745 CUL3Q13618 768 aa9□□□□□ -0.97
VPS41-201ENST00000265745 DDX39BQ13838 428 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 UAP1Q16222 522 aaPredicted RBP9□□□□□ -0.97
VPS41-201ENST00000265745 CPSF6Q16630 551 aaKnown RBP eCLIP9□□□□□ -0.97
VPS41-201ENST00000265745 C18orf63Q68DL7 685 aa9□□□□□ -0.97
VPS41-201ENST00000265745 MRM1Q6IN84 353 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 KLC3Q6P597 504 aa9□□□□□ -0.97
VPS41-201ENST00000265745 DGAT2L6Q6ZPD8 337 aa9□□□□□ -0.97
VPS41-201ENST00000265745 RTL4Q6ZR62 310 aa9□□□□□ -0.97
VPS41-201ENST00000265745 RGS9BPQ6ZS82 235 aa9□□□□□ -0.97
VPS41-201ENST00000265745 GOLGA7Q7Z5G4 137 aa9□□□□□ -0.97
VPS41-201ENST00000265745 EID3Q8N140 333 aa9□□□□□ -0.97
VPS41-201ENST00000265745 PLD6Q8N2A8 252 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 GOLM1Q8NBJ4 401 aa9□□□□□ -0.97
VPS41-201ENST00000265745 NUBPLQ8TB37 319 aa9□□□□□ -0.97
VPS41-201ENST00000265745 SLC44A1Q8WWI5 657 aa9□□□□□ -0.97
VPS41-201ENST00000265745 REPS1Q96D71 796 aa9□□□□□ -0.97
VPS41-201ENST00000265745 MTFMTQ96DP5 389 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 FUT8Q9BYC5 575 aa9□□□□□ -0.97
VPS41-201ENST00000265745 DEFB127Q9H1M4 99 aa9□□□□□ -0.97
VPS41-201ENST00000265745 DDX31Q9H8H2 851 aaKnown RBP9□□□□□ -0.97
VPS41-201ENST00000265745 ZDHHC11Q9H8X9 412 aa9□□□□□ -0.97
VPS41-201ENST00000265745 NINJ2Q9NZG7 142 aa9□□□□□ -0.97
VPS41-201ENST00000265745 PPT2Q9UMR5 302 aa9□□□□□ -0.97
VPS41-201ENST00000265745 RNF11Q9Y3C5 154 aa9□□□□□ -0.97
VPS41-201ENST00000265745 ASB4Q9Y574 426 aa9□□□□□ -0.97
VPS41-201ENST00000265745 LRBAP50851 2863 aa9□□□□□ -0.97
VPS41-201ENST00000265745 CPAMD8Q8IZJ3 1885 aa9□□□□□ -0.97
VPS41-201ENST00000265745 A0A0A6YYD5 115 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 A0A0G2JMM0 328 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 A0A1W2PPB8 328 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 A0A1W2PR48 441 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 A0A1W2PRS3 328 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 KIR3DP1A8MWS1 328 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 G3V3Y1 287 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 HRKO00198 91 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 EIF1AYO14602 144 aaKnown RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 TMPRSS11DO60235 418 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 EEDO75530 441 aaKnown RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 PRKRAO75569 313 aaKnown RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 URI1O94763 535 aaPredicted RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 GPR75O95800 540 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 RBP1P09455 135 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 GPC1P35052 558 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 BSGP35613 385 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 MAGEA12P43365 314 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 PIK3CGP48736 1102 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 SERPINB8P50452 374 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 NEK2P51955 445 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 TNFRSF17Q02223 184 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 PLGLB1Q02325 96 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 FOXO1Q12778 655 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 ASPHQ12797 758 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 GTF2H2Q13888 395 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 WHAMMP3Q1A5X7 153 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 HYAL4Q2M3T9 481 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 ZNF791Q3KP31 576 aaPredicted RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 TECRLQ5HYJ1 363 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 EMC4Q5J8M3 183 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 NDUFAF5Q5TEU4 345 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 GTF2H2CQ6P1K8 395 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 PAOXQ6QHF9 649 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 OPN5Q6U736 354 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 CEP128Q6ZU80 1094 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 GDF7Q7Z4P5 450 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 CD163Q86VB7 1156 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms