RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PCDHB7Q9Y5E2 793 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 SNX11Q9Y5W9 270 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ARL5AQ9Y689 179 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 PIRO00625 290 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 OR7A17O14581 309 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 CD3EAPO15446 510 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 GLP2RO95838 553 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 OPN1SWP03999 348 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 RD3LP0DJH9 198 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ANXA3P12429 323 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 HOXB9P17482 250 aaPredicted RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 PSMA1P25786 263 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 CD79BP40259 229 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 CDKN1CP49918 316 aaPredicted RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 ITGA1P56199 1179 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 HSF2Q03933 536 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 CSTF3Q12996 717 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 SPHARQ15513 63 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 HSD17B12Q53GQ0 312 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ARHGAP12Q8IWW6 846 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 KLHDC8BQ8IXV7 354 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ZNF687Q8N1G0 1237 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 LRRC52Q8N7C0 313 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 BVESQ8NE79 360 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 OR13C4Q8NGS5 318 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 CNOT9Q92600 299 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 SCMH1Q96GD3 660 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 SMIM14Q96QK8 99 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 DDOQ99489 341 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 CMSS1Q9BQ75 279 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 EMC7Q9NPA0 242 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 CRTAC1Q9NQ79 661 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 DDIT4Q9NX09 232 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 SLC39A1Q9NY26 324 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 PFDN2Q9UHV9 154 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ADAM30Q9UKF2 790 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ADAMDEC1O15204 470 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 APOC1P02654 83 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ALPIP09923 528 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ACRP10323 421 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 GJA1P17302 382 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 TACR1P25103 407 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 STOMP27105 288 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 RPL9P32969 192 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 PNPLA4P41247 253 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 DCDC1P59894 354 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 CSNK2BP67870 215 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 EIF4HQ15056 248 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 PABPC1L2AQ5JQF8 200 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 FAM74A1Q5RGS3 127 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 IL20RBQ6UXL0 311 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 DDX53Q86TM3 631 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 PTOV1Q86YD1 416 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 MIB1Q86YT6 1006 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ATAD1Q8NBU5 361 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 CREB3L1Q96BA8 519 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 RPRD1AQ96P16 312 aaPredicted RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 FCRL5Q96RD9 977 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 POLR2J2Q9GZM3 115 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 NDUFB11Q9NX14 153 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 OR12D3Q9UGF7 316 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 IRAK3Q9Y616 596 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 GBF1Q92538 1859 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 PMS2P1A4D2B8 440 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 ANXA2P2A6NMY6 339 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 TTLL8A6PVC2 850 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 YJEFN3A6XGL0 299 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 GPR171O14626 319 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 HCN1O60741 890 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 GATBO75879 557 aaKnown RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 HPXP02790 462 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 FGF2P09038 288 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 AKT1P31749 480 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 ERVK-25P63136 954 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 KCNJ10P78508 379 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 DSC2Q02487 901 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 PTGES3Q15185 160 aaKnown RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 SF3A2Q15428 464 aaKnown RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 MANEALQ5VSG8 457 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 ZNF730Q6ZMV8 503 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 TRMT11Q7Z4G4 463 aaKnown RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 SPATA2LQ8IUW3 424 aaPredicted RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 ADGRF3Q8IZF5 1079 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 TTC9BQ8N6N2 239 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 KIAA1191Q96A73 305 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 LRRC46Q96FV0 321 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 NELL2Q99435 816 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 H2AFJQ9BTM1 129 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 NUSAP1Q9BXS6 441 aaKnown RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 CHIAQ9BZP6 476 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 DPY30Q9C005 99 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 OR51J1Q9H342 316 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 C11orf16Q9NQ32 467 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 TMEM30AQ9NV96 361 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 RBM22Q9NW64 420 aaKnown RBP eCLIP8.35□□□□□ -1.07
VAPB-201ENST00000265619 IMPAD1Q9NX62 359 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SPATA2Q9UM82 520 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 DTX4Q9Y2E6 619 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 DLGAP4Q9Y2H0 992 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 AAR2Q9Y312 384 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms