RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PELOQ9BRX2 385 aaKnown RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 TMEM120AQ9BXJ8 343 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 CLMPQ9H6B4 373 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 C19orf25Q9UFG5 118 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 RAXQ9Y2V3 346 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 MRPS18BQ9Y676 258 aaKnown RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 A0A0G2JND7 137 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 GLOD5A6NK44 160 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 K7ENP7 123 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 LDB3O75112 727 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 PRKRAO75569 313 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 FAM107AO95990 144 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 CPMP14384 443 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 DDX5P17844 614 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 CSNK2A2P19784 350 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 XKP51811 444 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 CLNS1AP54105 237 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 SRSF11Q05519 484 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 MGAT2Q10469 447 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 SLC13A2Q13183 592 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 SRSF6Q13247 344 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 ELAVL1Q15717 326 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 MINDY4Q4G0A6 757 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 FAM69BQ5VUD6 431 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 INO80CQ6PI98 192 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 SHISA6Q6ZSJ9 500 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 CPEB2Q7Z5Q1 589 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 MRGPREQ86SM8 312 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 RAB43Q86YS6 212 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 TICAM1Q8IUC6 712 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 ANKS4BQ8N8V4 417 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 NFAM1Q8NET5 270 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 PSMA8Q8TAA3 256 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 SUN3Q8TAQ9 357 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 ZCCHC14Q8WYQ9 949 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 TSLPQ969D9 159 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 ERP27Q96DN0 273 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 VPS50Q96JG6 964 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 TEX37Q96LM6 180 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 CCT8L2Q96SF2 557 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 PRM3Q9NNZ6 103 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 ADAP2Q9NPF8 381 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 SLC52A3Q9NQ40 469 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 ACSS1Q9NUB1 689 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-201ENST00000265304 UTS2RQ9UKP6 389 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 TRIM33Q9UPN9 1127 aa13.36□□□□□ -0.27
SSBP1-201ENST00000265304 IGHV1-45A0A0A0MS14 117 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 SLC22A2O15244 555 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 CDC123O75794 336 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-201ENST00000265304 SLITRK5O94991 958 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 COX6A1P12074 109 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 PORP16435 677 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-201ENST00000265304 PIK3R1P27986 724 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 IL12AP29459 219 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 HPCAL1P37235 193 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 WNT3P56703 355 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 UFM1P61960 85 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 PHC1P78364 1004 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 ACTN3Q08043 901 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-201ENST00000265304 STX4Q12846 297 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 MAP4K2Q12851 820 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 PCOLCEQ15113 449 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 SPRED3Q2MJR0 410 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 ZNF385BQ569K4 471 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 NXNQ6DKJ4 435 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 RIPOR1Q6ZS17 1223 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 LANCL3Q6ZV70 420 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 NDUFAF7Q7L592 441 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 CPLX4Q7Z7G2 160 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 FUNDC1Q8IVP5 155 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 ARMC10Q8N2F6 343 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 KRTCAP2Q8N6L1 136 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 TSPEARQ8WU66 669 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 PTPMT1Q8WUK0 201 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-201ENST00000265304 METTL21AQ8WXB1 218 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 PRPF18Q99633 342 aaKnown RBP13.35□□□□□ -0.27
SSBP1-201ENST00000265304 ELAC2Q9BQ52 826 aaKnown RBP13.35□□□□□ -0.27
SSBP1-201ENST00000265304 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 SEMA4CQ9C0C4 833 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 BHLHE41Q9C0J9 482 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-201ENST00000265304 MIEF1Q9NQG6 463 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 NTMQ9P121 344 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 ZNF639Q9UID6 485 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 COPG1Q9Y678 874 aaKnown RBP13.35□□□□□ -0.27
SSBP1-201ENST00000265304 ITPR1Q14643 2758 aa13.35□□□□□ -0.27
SSBP1-201ENST00000265304 PIEZO2Q9H5I5 2752 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 CPAMD8Q8IZJ3 1885 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 E9PBE3 544 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 PLOD2O00469 737 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 NKX2-8O15522 239 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 KLHL41O60662 606 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 SLC22A3O75751 556 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 IGKV3-11P04433 115 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 LAMP1P11279 417 aa13.34□□□□□ -0.27
SSBP1-201ENST00000265304 S1PR1P21453 382 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms