RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CYP27C1Q4G0S4 372 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TJAP1Q5JTD0 557 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 HECTD3Q5T447 861 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 FAM205BPQ63HN1 556 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 FAAH2Q6GMR7 532 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 KIAA1211LQ6NV74 962 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 OR8H3Q8N146 312 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 LINC00471Q8N535 108 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF680Q8NEM1 530 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 HUS1BQ8NHY5 278 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 C2orf15Q8WU43 125 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ACOT12Q8WYK0 555 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 NACC2Q96BF6 587 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 OTULINQ96BN8 352 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 GFM1Q96RP9 751 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 PARK7Q99497 189 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 SPNS1Q9H2V7 528 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC28A3Q9HAS3 691 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 MRPS18AQ9NVS2 196 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TVP23BQ9NYZ1 205 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 RHCGQ9UBD6 479 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TESQ9UGI8 421 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 MAP4K5Q9Y4K4 846 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 MTMR11A4FU01 709 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 C5orf58C9J3I9 102 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 MEN1O00255 615 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TSPAN9O75954 239 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 IFNA7P01567 189 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TPOP07202 933 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 CTRB1P17538 263 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 FEN1P39748 380 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ETV5P41161 510 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TUFMP49411 452 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ETV1P50549 477 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 RAB40BQ12829 278 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 MRPL58Q14197 206 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 LEXMQ3ZCV2 418 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 CTRB2Q6GPI1 263 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 CD200R1LQ6Q8B3 271 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF852Q6ZMS4 543 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF280BQ86YH2 543 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 OVCA2Q8WZ82 227 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TM9SF4Q92544 642 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ASIC4Q96FT7 647 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC6A18Q96N87 628 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 PKP4Q99569 1192 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 WRAP53Q9BUR4 548 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 GALNT9Q9HCQ5 603 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 FGF20Q9NP95 211 aaPredicted RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TMEM161AQ9NX61 479 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 IGLV3-16A0A075B6K0 115 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 ISM1B1AKI9 464 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 FABP7O15540 132 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 TLX2O43763 284 aaPredicted RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 SGTAO43765 313 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 LZTS3O60299 673 aaPredicted RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 HPGDSO60760 199 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 SOX14O95416 240 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 EOMESO95936 686 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 SGSHP51688 502 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 DSTNP60981 165 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 RPS25P62851 125 aaKnown RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 RETSATQ6NUM9 610 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 PAQR6Q6TCH4 344 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 OR4K1Q8NGD4 311 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 PHF21AQ96BD5 680 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 NECTIN4Q96NY8 510 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 PPIL3Q9H2H8 161 aaKnown RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 RERGLQ9H628 205 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 ZSCAN32Q9NX65 697 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 PRG3Q9Y2Y8 225 aaPredicted RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 SF3B6Q9Y3B4 125 aaKnown RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 SMLR1H3BR10 107 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 I3L521 148 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 PRKYO43930 277 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 STC2O76061 302 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 RAF1P04049 648 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 ELAVL4P26378 380 aaKnown RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 STOMP27105 288 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 CCND3P30281 292 aaPredicted RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 EVI2BP34910 448 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 CASP9P55211 416 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 BAMBIQ13145 260 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 SF1Q15637 639 aaKnown RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF284Q2VY69 593 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 TMEM107Q6UX40 140 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 CD300LDQ6UXZ3 194 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 CEACAM20Q6UY09 585 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 ANKS3Q6ZW76 656 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 USP45Q70EL2 814 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 GPR26Q8NDV2 337 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 LYSMD1Q96S90 227 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 ATF6BQ99941 703 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 CLEC4MQ9H2X3 399 aaPredicted RBP11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 SEMA3GQ9NS98 782 aa11.78□□□□□ -0.52
CHMP2B-201ENST00000263780 LOC102723532A0A0G2JNH3 316 aa11.77□□□□□ -0.52
CHMP2B-201ENST00000263780 E7EQ34 232 aa11.77□□□□□ -0.52
CHMP2B-201ENST00000263780 FFAR1O14842 300 aa11.77□□□□□ -0.52
CHMP2B-201ENST00000263780 DDNO94850 711 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms